Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Gm34391-201ENSMUST00000203706 907 ntBASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13d-1A0A075B606 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Gm28659-201ENSMUST00000188013 759 ntBASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13d-1A0A075B606 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gm13312-201ENSMUST00000119631 718 ntBASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gm12644-201ENSMUST00000119935 606 ntBASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Birc2-201ENSMUST00000054878 378 ntBASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13d-1A0A075B606 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-1A0A075B606 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-1A0A075B606 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav13d-1A0A075B606 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms