Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv4A0A075B5I2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv4A0A075B5I2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Rprl3-201ENSMUST00000157400 290 ntBASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Gm27704-201ENSMUST00000185094 107 ntBASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Trbv4A0A075B5I2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv4A0A075B5I2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv4A0A075B5I2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv4A0A075B5I2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms