Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cacnb1Q8R3Z5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Gm37444-201ENSMUST00000193605 439 ntBASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Gm4799-201ENSMUST00000095396 657 ntBASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cacnb1Q8R3Z5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cacnb1Q8R3Z5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Cacnb1Q8R3Z5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.4■■□□□ 1.66
Cacnb1Q8R3Z5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Cacnb1Q8R3Z5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.4■■□□□ 1.66
Cacnb1Q8R3Z5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cacnb1Q8R3Z5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Cacnb1Q8R3Z5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.38■■□□□ 1.65
Cacnb1Q8R3Z5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.38■■□□□ 1.65
Cacnb1Q8R3Z5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cacnb1Q8R3Z5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cacnb1Q8R3Z5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Cacnb1Q8R3Z5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cacnb1Q8R3Z5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Cacnb1Q8R3Z5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cacnb1Q8R3Z5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Cacnb1Q8R3Z5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cacnb1Q8R3Z5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.35■■□□□ 1.65
Cacnb1Q8R3Z5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cacnb1Q8R3Z5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Cacnb1Q8R3Z5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Cacnb1Q8R3Z5 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.34■■□□□ 1.65
Cacnb1Q8R3Z5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.34■■□□□ 1.65
Cacnb1Q8R3Z5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cacnb1Q8R3Z5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cacnb1Q8R3Z5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cacnb1Q8R3Z5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cacnb1Q8R3Z5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cacnb1Q8R3Z5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.32■■□□□ 1.64
Cacnb1Q8R3Z5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Cacnb1Q8R3Z5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cacnb1Q8R3Z5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cacnb1Q8R3Z5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cacnb1Q8R3Z5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.31■■□□□ 1.64
Cacnb1Q8R3Z5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cacnb1Q8R3Z5 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.31■■□□□ 1.64
Cacnb1Q8R3Z5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cacnb1Q8R3Z5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cacnb1Q8R3Z5 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 Mir3960-201ENSMUST00000198213 73 ntBASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 Gm45364-201ENSMUST00000210883 159 ntBASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Cacnb1Q8R3Z5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cacnb1Q8R3Z5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.28■■□□□ 1.64
Cacnb1Q8R3Z5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cacnb1Q8R3Z5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cacnb1Q8R3Z5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.28■■□□□ 1.64
Cacnb1Q8R3Z5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cacnb1Q8R3Z5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cacnb1Q8R3Z5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cacnb1Q8R3Z5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.27■■□□□ 1.64
Cacnb1Q8R3Z5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cacnb1Q8R3Z5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cacnb1Q8R3Z5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Cacnb1Q8R3Z5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.23■■□□□ 1.63
Cacnb1Q8R3Z5 Gm6311-201ENSMUST00000073790 878 ntBASIC25.23■■□□□ 1.63
Cacnb1Q8R3Z5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Cacnb1Q8R3Z5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Cacnb1Q8R3Z5 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.22■■□□□ 1.63
Cacnb1Q8R3Z5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cacnb1Q8R3Z5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cacnb1Q8R3Z5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.21■■□□□ 1.63
Cacnb1Q8R3Z5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.2■■□□□ 1.63
Cacnb1Q8R3Z5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cacnb1Q8R3Z5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.19■■□□□ 1.62
Cacnb1Q8R3Z5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cacnb1Q8R3Z5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.19■■□□□ 1.62
Cacnb1Q8R3Z5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms