Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Cfap54Q8C6S9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cfap54Q8C6S9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Cfap54Q8C6S9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.7■■□□□ 1.22
Cfap54Q8C6S9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap54Q8C6S9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cfap54Q8C6S9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.69■■□□□ 1.22
Cfap54Q8C6S9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap54Q8C6S9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap54Q8C6S9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Cfap54Q8C6S9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap54Q8C6S9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap54Q8C6S9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap54Q8C6S9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap54Q8C6S9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Cfap54Q8C6S9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.67■■□□□ 1.22
Cfap54Q8C6S9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cfap54Q8C6S9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.67■■□□□ 1.22
Cfap54Q8C6S9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Cfap54Q8C6S9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.66■■□□□ 1.22
Cfap54Q8C6S9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.66■■□□□ 1.22
Cfap54Q8C6S9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cfap54Q8C6S9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.65■■□□□ 1.22
Cfap54Q8C6S9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap54Q8C6S9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cfap54Q8C6S9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cfap54Q8C6S9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.63■■□□□ 1.21
Cfap54Q8C6S9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cfap54Q8C6S9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cfap54Q8C6S9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cfap54Q8C6S9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cfap54Q8C6S9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Cfap54Q8C6S9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.61■■□□□ 1.21
Cfap54Q8C6S9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cfap54Q8C6S9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cfap54Q8C6S9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cfap54Q8C6S9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cfap54Q8C6S9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.59■■□□□ 1.21
Cfap54Q8C6S9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.59■■□□□ 1.21
Cfap54Q8C6S9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.59■■□□□ 1.21
Cfap54Q8C6S9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cfap54Q8C6S9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cfap54Q8C6S9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Cfap54Q8C6S9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.57■■□□□ 1.2
Cfap54Q8C6S9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cfap54Q8C6S9 Gm45102-201ENSMUST00000207427 857 ntBASIC22.55■■□□□ 1.2
Cfap54Q8C6S9 Rps24-207ENSMUST00000224568 714 ntBASIC22.55■■□□□ 1.2
Cfap54Q8C6S9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Cfap54Q8C6S9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.55■■□□□ 1.2
Cfap54Q8C6S9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cfap54Q8C6S9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap54Q8C6S9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.54■■□□□ 1.2
Cfap54Q8C6S9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap54Q8C6S9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cfap54Q8C6S9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap54Q8C6S9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cfap54Q8C6S9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.52■■□□□ 1.2
Cfap54Q8C6S9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cfap54Q8C6S9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cfap54Q8C6S9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap54Q8C6S9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cfap54Q8C6S9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Cfap54Q8C6S9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.51■■□□□ 1.19
Cfap54Q8C6S9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cfap54Q8C6S9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cfap54Q8C6S9 Gm14117-201ENSMUST00000122417 843 ntBASIC22.5■■□□□ 1.19
Cfap54Q8C6S9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.5■■□□□ 1.19
Cfap54Q8C6S9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap54Q8C6S9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap54Q8C6S9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap54Q8C6S9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cfap54Q8C6S9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cfap54Q8C6S9 Gm13238-201ENSMUST00000117655 780 ntBASIC22.48■■□□□ 1.19
Cfap54Q8C6S9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap54Q8C6S9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cfap54Q8C6S9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap54Q8C6S9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap54Q8C6S9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cfap54Q8C6S9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Cfap54Q8C6S9 Gm15820-201ENSMUST00000201566 728 ntBASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Amer2-203ENSMUST00000225247 2662 ntBASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cfap54Q8C6S9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cfap54Q8C6S9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap54Q8C6S9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cfap54Q8C6S9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cfap54Q8C6S9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cfap54Q8C6S9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap54Q8C6S9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cfap54Q8C6S9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.43■■□□□ 1.18
Cfap54Q8C6S9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cfap54Q8C6S9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms