Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm15039-201ENSMUST00000118914 875 ntBASIC31.39■■■□□ 2.61
Col16a1Q8BLX7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.38■■■□□ 2.61
Col16a1Q8BLX7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Col16a1Q8BLX7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Col16a1Q8BLX7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Col16a1Q8BLX7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.37■■■□□ 2.61
Col16a1Q8BLX7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Col16a1Q8BLX7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Col16a1Q8BLX7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.36■■■□□ 2.61
Col16a1Q8BLX7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col16a1Q8BLX7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col16a1Q8BLX7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Col16a1Q8BLX7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Col16a1Q8BLX7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Col16a1Q8BLX7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Col16a1Q8BLX7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Col16a1Q8BLX7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.33■■■□□ 2.61
Col16a1Q8BLX7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col16a1Q8BLX7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col16a1Q8BLX7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Col16a1Q8BLX7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Col16a1Q8BLX7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Col16a1Q8BLX7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Col16a1Q8BLX7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Col16a1Q8BLX7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Col16a1Q8BLX7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.28■■■□□ 2.6
Col16a1Q8BLX7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Col16a1Q8BLX7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Col16a1Q8BLX7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.27■■■□□ 2.6
Col16a1Q8BLX7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col16a1Q8BLX7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.26■■■□□ 2.59
Col16a1Q8BLX7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col16a1Q8BLX7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col16a1Q8BLX7 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.23■■■□□ 2.59
Col16a1Q8BLX7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.22■■■□□ 2.59
Col16a1Q8BLX7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Col16a1Q8BLX7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col16a1Q8BLX7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col16a1Q8BLX7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col16a1Q8BLX7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Col16a1Q8BLX7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Col16a1Q8BLX7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Col16a1Q8BLX7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col16a1Q8BLX7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col16a1Q8BLX7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Col16a1Q8BLX7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col16a1Q8BLX7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col16a1Q8BLX7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col16a1Q8BLX7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Col16a1Q8BLX7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Col16a1Q8BLX7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
Col16a1Q8BLX7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.14■■■□□ 2.58
Col16a1Q8BLX7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col16a1Q8BLX7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col16a1Q8BLX7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Col16a1Q8BLX7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Col16a1Q8BLX7 Gm15546-201ENSMUST00000122095 826 ntBASIC31.1■■■□□ 2.57
Col16a1Q8BLX7 Gm37847-201ENSMUST00000192163 1497 ntBASIC31.09■■■□□ 2.57
Col16a1Q8BLX7 Gm31748-201ENSMUST00000194938 1497 ntBASIC31.09■■■□□ 2.57
Col16a1Q8BLX7 Gm5522-201ENSMUST00000189483 1242 ntBASIC31.08■■■□□ 2.57
Col16a1Q8BLX7 Terc-201ENSMUST00000082862 423 ntBASIC31.07■■■□□ 2.56
Col16a1Q8BLX7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col16a1Q8BLX7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Col16a1Q8BLX7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC31.06■■■□□ 2.56
Col16a1Q8BLX7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Col16a1Q8BLX7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC31.05■■■□□ 2.56
Col16a1Q8BLX7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Col16a1Q8BLX7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
Col16a1Q8BLX7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Col16a1Q8BLX7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Col16a1Q8BLX7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.04■■■□□ 2.56
Col16a1Q8BLX7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Col16a1Q8BLX7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
Col16a1Q8BLX7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Col16a1Q8BLX7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Col16a1Q8BLX7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Col16a1Q8BLX7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Col16a1Q8BLX7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Col16a1Q8BLX7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Col16a1Q8BLX7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC30.98■■■□□ 2.55
Col16a1Q8BLX7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col16a1Q8BLX7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col16a1Q8BLX7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Col16a1Q8BLX7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms