Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc36Q6PDM4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc36Q6PDM4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc36Q6PDM4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc36Q6PDM4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc36Q6PDM4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc36Q6PDM4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc36Q6PDM4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc36Q6PDM4 Gm24970-201ENSMUST00000175582 82 ntBASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc36Q6PDM4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc36Q6PDM4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms