Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtrxQ61687 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtrxQ61687 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtrxQ61687 Gm37136-201ENSMUST00000194368 194 ntBASIC21.17■□□□□ 0.98
AtrxQ61687 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AtrxQ61687 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AtrxQ61687 Gm9959-201ENSMUST00000068277 390 ntBASIC21.16■□□□□ 0.98
AtrxQ61687 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AtrxQ61687 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.16■□□□□ 0.98
AtrxQ61687 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.16■□□□□ 0.98
AtrxQ61687 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtrxQ61687 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.15■□□□□ 0.98
AtrxQ61687 Gm13238-201ENSMUST00000117655 780 ntBASIC21.15■□□□□ 0.98
AtrxQ61687 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AtrxQ61687 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtrxQ61687 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AtrxQ61687 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AtrxQ61687 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AtrxQ61687 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
AtrxQ61687 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
AtrxQ61687 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AtrxQ61687 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.12■□□□□ 0.97
AtrxQ61687 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
AtrxQ61687 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AtrxQ61687 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AtrxQ61687 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AtrxQ61687 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AtrxQ61687 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.1■□□□□ 0.97
AtrxQ61687 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.1■□□□□ 0.97
AtrxQ61687 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AtrxQ61687 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AtrxQ61687 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.09■□□□□ 0.97
AtrxQ61687 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AtrxQ61687 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
AtrxQ61687 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AtrxQ61687 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.09■□□□□ 0.97
AtrxQ61687 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.08■□□□□ 0.97
AtrxQ61687 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
AtrxQ61687 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
AtrxQ61687 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtrxQ61687 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AtrxQ61687 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtrxQ61687 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.06■□□□□ 0.96
AtrxQ61687 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
AtrxQ61687 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AtrxQ61687 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AtrxQ61687 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
AtrxQ61687 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.06■□□□□ 0.96
AtrxQ61687 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AtrxQ61687 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AtrxQ61687 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AtrxQ61687 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.05■□□□□ 0.96
AtrxQ61687 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AtrxQ61687 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AtrxQ61687 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AtrxQ61687 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AtrxQ61687 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AtrxQ61687 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.03■□□□□ 0.96
AtrxQ61687 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
AtrxQ61687 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AtrxQ61687 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.02■□□□□ 0.96
AtrxQ61687 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AtrxQ61687 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AtrxQ61687 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AtrxQ61687 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AtrxQ61687 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.01■□□□□ 0.95
AtrxQ61687 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AtrxQ61687 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AtrxQ61687 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AtrxQ61687 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AtrxQ61687 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21■□□□□ 0.95
AtrxQ61687 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21■□□□□ 0.95
AtrxQ61687 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AtrxQ61687 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.99■□□□□ 0.95
AtrxQ61687 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.99■□□□□ 0.95
AtrxQ61687 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AtrxQ61687 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.98■□□□□ 0.95
AtrxQ61687 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtrxQ61687 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AtrxQ61687 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtrxQ61687 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AtrxQ61687 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtrxQ61687 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtrxQ61687 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.97■□□□□ 0.95
AtrxQ61687 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AtrxQ61687 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AtrxQ61687 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AtrxQ61687 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AtrxQ61687 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AtrxQ61687 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AtrxQ61687 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AtrxQ61687 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AtrxQ61687 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AtrxQ61687 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.96■□□□□ 0.95
AtrxQ61687 Gm43566-201ENSMUST00000196851 808 ntBASIC20.96■□□□□ 0.95
AtrxQ61687 Gm45444-201ENSMUST00000211394 898 ntBASIC20.96■□□□□ 0.95
AtrxQ61687 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AtrxQ61687 Gm9812-201ENSMUST00000061934 968 ntBASIC20.95■□□□□ 0.94
AtrxQ61687 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AtrxQ61687 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms