Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h4Q60641 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h4Q60641 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nr1h4Q60641 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h4Q60641 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h4Q60641 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.78■■□□□ 1.08
Nr1h4Q60641 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nr1h4Q60641 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.78■■□□□ 1.08
Nr1h4Q60641 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h4Q60641 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.77■■□□□ 1.08
Nr1h4Q60641 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nr1h4Q60641 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.76■■□□□ 1.07
Nr1h4Q60641 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nr1h4Q60641 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h4Q60641 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nr1h4Q60641 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h4Q60641 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nr1h4Q60641 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nr1h4Q60641 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nr1h4Q60641 Gm45855-201ENSMUST00000212546 880 ntBASIC21.73■■□□□ 1.07
Nr1h4Q60641 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h4Q60641 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h4Q60641 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h4Q60641 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h4Q60641 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h4Q60641 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h4Q60641 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h4Q60641 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h4Q60641 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Nr1h4Q60641 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Nr1h4Q60641 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h4Q60641 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Nr1h4Q60641 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h4Q60641 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h4Q60641 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h4Q60641 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h4Q60641 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h4Q60641 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h4Q60641 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.68■■□□□ 1.06
Nr1h4Q60641 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h4Q60641 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nr1h4Q60641 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
Nr1h4Q60641 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Nr1h4Q60641 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nr1h4Q60641 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nr1h4Q60641 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.65■■□□□ 1.06
Nr1h4Q60641 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h4Q60641 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h4Q60641 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.65■■□□□ 1.06
Nr1h4Q60641 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nr1h4Q60641 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Nr1h4Q60641 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nr1h4Q60641 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Nr1h4Q60641 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h4Q60641 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.64■■□□□ 1.05
Nr1h4Q60641 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h4Q60641 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h4Q60641 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h4Q60641 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h4Q60641 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h4Q60641 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h4Q60641 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nr1h4Q60641 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.62■■□□□ 1.05
Nr1h4Q60641 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h4Q60641 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nr1h4Q60641 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Nr1h4Q60641 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Nr1h4Q60641 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Nr1h4Q60641 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h4Q60641 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h4Q60641 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h4Q60641 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h4Q60641 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nr1h4Q60641 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h4Q60641 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h4Q60641 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h4Q60641 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h4Q60641 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h4Q60641 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Nr1h4Q60641 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms