Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.65■■□□□ 1.22
Limk1P53668 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Limk1P53668 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.64■■□□□ 1.21
Limk1P53668 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Limk1P53668 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Limk1P53668 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.63■■□□□ 1.21
Limk1P53668 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Limk1P53668 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Limk1P53668 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.62■■□□□ 1.21
Limk1P53668 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Limk1P53668 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.62■■□□□ 1.21
Limk1P53668 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.62■■□□□ 1.21
Limk1P53668 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Limk1P53668 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Limk1P53668 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Limk1P53668 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Limk1P53668 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Limk1P53668 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Limk1P53668 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.6■■□□□ 1.21
Limk1P53668 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Limk1P53668 Gm9812-201ENSMUST00000061934 968 ntBASIC22.6■■□□□ 1.21
Limk1P53668 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Limk1P53668 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Limk1P53668 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Limk1P53668 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Limk1P53668 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.57■■□□□ 1.2
Limk1P53668 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Limk1P53668 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Limk1P53668 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Limk1P53668 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.56■■□□□ 1.2
Limk1P53668 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Limk1P53668 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.56■■□□□ 1.2
Limk1P53668 Rps24-207ENSMUST00000224568 714 ntBASIC22.55■■□□□ 1.2
Limk1P53668 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Limk1P53668 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.53■■□□□ 1.2
Limk1P53668 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.53■■□□□ 1.2
Limk1P53668 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Limk1P53668 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Limk1P53668 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Limk1P53668 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.52■■□□□ 1.2
Limk1P53668 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.52■■□□□ 1.2
Limk1P53668 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Limk1P53668 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Limk1P53668 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Limk1P53668 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Limk1P53668 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Limk1P53668 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Limk1P53668 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Limk1P53668 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Limk1P53668 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Limk1P53668 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Limk1P53668 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Limk1P53668 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.49■■□□□ 1.19
Limk1P53668 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.49■■□□□ 1.19
Limk1P53668 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Limk1P53668 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Limk1P53668 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Limk1P53668 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Limk1P53668 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Limk1P53668 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Limk1P53668 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Limk1P53668 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.47■■□□□ 1.19
Limk1P53668 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.47■■□□□ 1.19
Limk1P53668 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Limk1P53668 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Limk1P53668 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Limk1P53668 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Limk1P53668 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Limk1P53668 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Limk1P53668 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Limk1P53668 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Limk1P53668 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.45■■□□□ 1.18
Limk1P53668 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Limk1P53668 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Limk1P53668 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Limk1P53668 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Limk1P53668 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Limk1P53668 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Limk1P53668 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Limk1P53668 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Limk1P53668 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Limk1P53668 Gm45102-201ENSMUST00000207427 857 ntBASIC22.43■■□□□ 1.18
Limk1P53668 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Limk1P53668 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.42■■□□□ 1.18
Limk1P53668 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.42■■□□□ 1.18
Limk1P53668 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Limk1P53668 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Limk1P53668 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Limk1P53668 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
Limk1P53668 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Limk1P53668 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Limk1P53668 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Limk1P53668 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Limk1P53668 Gm15820-201ENSMUST00000201566 728 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms