Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-6P43688 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.83■■□□□ 1.09
Nkx2-6P43688 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.83■■□□□ 1.09
Nkx2-6P43688 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Nkx2-6P43688 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.83■■□□□ 1.09
Nkx2-6P43688 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-6P43688 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-6P43688 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Nkx2-6P43688 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-6P43688 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-6P43688 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.82■■□□□ 1.08
Nkx2-6P43688 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-6P43688 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
Nkx2-6P43688 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-6P43688 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-6P43688 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-6P43688 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-6P43688 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.8■■□□□ 1.08
Nkx2-6P43688 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.8■■□□□ 1.08
Nkx2-6P43688 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-6P43688 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.8■■□□□ 1.08
Nkx2-6P43688 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-6P43688 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-6P43688 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-6P43688 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Nkx2-6P43688 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-6P43688 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.78■■□□□ 1.08
Nkx2-6P43688 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-6P43688 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-6P43688 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-6P43688 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.77■■□□□ 1.08
Nkx2-6P43688 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-6P43688 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-6P43688 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nkx2-6P43688 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nkx2-6P43688 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nkx2-6P43688 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nkx2-6P43688 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-6P43688 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-6P43688 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-6P43688 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-6P43688 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.75■■□□□ 1.07
Nkx2-6P43688 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nkx2-6P43688 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-6P43688 Gm7332-201ENSMUST00000118351 454 ntBASIC21.74■■□□□ 1.07
Nkx2-6P43688 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-6P43688 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Gm14523-201ENSMUST00000117260 558 ntBASIC21.73■■□□□ 1.07
Nkx2-6P43688 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx2-6P43688 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-6P43688 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-6P43688 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.71■■□□□ 1.07
Nkx2-6P43688 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.71■■□□□ 1.07
Nkx2-6P43688 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-6P43688 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx2-6P43688 Gm27502-201ENSMUST00000183495 199 ntBASIC21.69■■□□□ 1.06
Nkx2-6P43688 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-6P43688 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.68■■□□□ 1.06
Nkx2-6P43688 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-6P43688 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Nkx2-6P43688 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nkx2-6P43688 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-6P43688 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-6P43688 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-6P43688 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-6P43688 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-6P43688 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-6P43688 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx2-6P43688 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.65■■□□□ 1.06
Nkx2-6P43688 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nkx2-6P43688 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-6P43688 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-6P43688 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Nkx2-6P43688 Terc-201ENSMUST00000082862 423 ntBASIC21.64■■□□□ 1.05
Nkx2-6P43688 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-6P43688 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.63■■□□□ 1.05
Nkx2-6P43688 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.63■■□□□ 1.05
Nkx2-6P43688 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms