Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Slc6a13P31649 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Slc6a13P31649 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a13P31649 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a13P31649 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Slc6a13P31649 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Slc6a13P31649 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Slc6a13P31649 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a13P31649 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a13P31649 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a13P31649 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a13P31649 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a13P31649 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a13P31649 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a13P31649 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a13P31649 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.42■■□□□ 1.34
Slc6a13P31649 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a13P31649 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.41■■□□□ 1.34
Slc6a13P31649 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a13P31649 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a13P31649 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Slc6a13P31649 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a13P31649 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Slc6a13P31649 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.39■■□□□ 1.34
Slc6a13P31649 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Slc6a13P31649 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Slc6a13P31649 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc6a13P31649 Gm4799-201ENSMUST00000095396 657 ntBASIC23.39■■□□□ 1.33
Slc6a13P31649 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc6a13P31649 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a13P31649 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a13P31649 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a13P31649 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Slc6a13P31649 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a13P31649 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a13P31649 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a13P31649 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a13P31649 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc6a13P31649 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc6a13P31649 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Slc6a13P31649 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Slc6a13P31649 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.35■■□□□ 1.33
Slc6a13P31649 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Slc6a13P31649 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.35■■□□□ 1.33
Slc6a13P31649 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc6a13P31649 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.34■■□□□ 1.33
Slc6a13P31649 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Slc6a13P31649 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.34■■□□□ 1.33
Slc6a13P31649 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Slc6a13P31649 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Slc6a13P31649 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.33■■□□□ 1.33
Slc6a13P31649 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a13P31649 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a13P31649 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Slc6a13P31649 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc6a13P31649 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.32■■□□□ 1.32
Slc6a13P31649 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.32■■□□□ 1.32
Slc6a13P31649 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a13P31649 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a13P31649 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc6a13P31649 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Slc6a13P31649 Mir3960-201ENSMUST00000198213 73 ntBASIC23.3■■□□□ 1.32
Slc6a13P31649 Gm45364-201ENSMUST00000210883 159 ntBASIC23.3■■□□□ 1.32
Slc6a13P31649 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.3■■□□□ 1.32
Slc6a13P31649 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc6a13P31649 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.3■■□□□ 1.32
Slc6a13P31649 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a13P31649 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a13P31649 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.28■■□□□ 1.32
Slc6a13P31649 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Slc6a13P31649 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a13P31649 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a13P31649 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a13P31649 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a13P31649 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a13P31649 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.25■■□□□ 1.31
Slc6a13P31649 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a13P31649 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a13P31649 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a13P31649 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a13P31649 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a13P31649 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a13P31649 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.23■■□□□ 1.31
Slc6a13P31649 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.23■■□□□ 1.31
Slc6a13P31649 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a13P31649 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a13P31649 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a13P31649 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.22■■□□□ 1.31
Slc6a13P31649 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.21■■□□□ 1.31
Slc6a13P31649 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Slc6a13P31649 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Slc6a13P31649 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a13P31649 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a13P31649 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.2■■□□□ 1.3
Slc6a13P31649 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a13P31649 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a13P31649 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.19■■□□□ 1.3
Slc6a13P31649 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a13P31649 Gm9812-201ENSMUST00000061934 968 ntBASIC23.19■■□□□ 1.3
Slc6a13P31649 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms