Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cd40P27512 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.87■□□□□ 0.93
Cd40P27512 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.86■□□□□ 0.93
Cd40P27512 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.86■□□□□ 0.93
Cd40P27512 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.86■□□□□ 0.93
Cd40P27512 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Cd40P27512 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cd40P27512 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd40P27512 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd40P27512 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd40P27512 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd40P27512 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cd40P27512 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd40P27512 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cd40P27512 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.83■□□□□ 0.93
Cd40P27512 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd40P27512 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd40P27512 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd40P27512 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd40P27512 Mir3960-201ENSMUST00000198213 73 ntBASIC20.82■□□□□ 0.92
Cd40P27512 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.82■□□□□ 0.92
Cd40P27512 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd40P27512 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd40P27512 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cd40P27512 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd40P27512 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd40P27512 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd40P27512 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cd40P27512 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.81■□□□□ 0.92
Cd40P27512 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd40P27512 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cd40P27512 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd40P27512 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd40P27512 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd40P27512 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cd40P27512 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd40P27512 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd40P27512 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd40P27512 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd40P27512 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd40P27512 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd40P27512 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.77■□□□□ 0.91
Cd40P27512 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd40P27512 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cd40P27512 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cd40P27512 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd40P27512 Gm9812-201ENSMUST00000061934 968 ntBASIC20.75■□□□□ 0.91
Cd40P27512 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.75■□□□□ 0.91
Cd40P27512 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.74■□□□□ 0.91
Cd40P27512 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd40P27512 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd40P27512 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd40P27512 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.73■□□□□ 0.91
Cd40P27512 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd40P27512 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd40P27512 Gm45364-201ENSMUST00000210883 159 ntBASIC20.73■□□□□ 0.91
Cd40P27512 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd40P27512 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd40P27512 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd40P27512 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd40P27512 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd40P27512 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.72■□□□□ 0.91
Cd40P27512 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd40P27512 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cd40P27512 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd40P27512 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cd40P27512 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd40P27512 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd40P27512 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.71■□□□□ 0.91
Cd40P27512 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd40P27512 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd40P27512 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.7■□□□□ 0.9
Cd40P27512 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd40P27512 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Cd40P27512 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
Cd40P27512 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40P27512 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40P27512 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40P27512 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40P27512 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cd40P27512 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd40P27512 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd40P27512 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.68■□□□□ 0.9
Cd40P27512 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.68■□□□□ 0.9
Cd40P27512 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.68■□□□□ 0.9
Cd40P27512 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cd40P27512 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40P27512 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.67■□□□□ 0.9
Cd40P27512 Gm6311-201ENSMUST00000073790 878 ntBASIC20.67■□□□□ 0.9
Cd40P27512 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40P27512 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cd40P27512 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd40P27512 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd40P27512 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.66■□□□□ 0.9
Cd40P27512 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms