Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hcn3O88705 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hcn3O88705 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.98■■□□□ 1.11
Hcn3O88705 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn3O88705 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn3O88705 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hcn3O88705 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.96■■□□□ 1.11
Hcn3O88705 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hcn3O88705 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Hcn3O88705 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Hcn3O88705 Gm24970-201ENSMUST00000175582 82 ntBASIC21.95■■□□□ 1.1
Hcn3O88705 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.95■■□□□ 1.1
Hcn3O88705 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hcn3O88705 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Hcn3O88705 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.94■■□□□ 1.1
Hcn3O88705 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Hcn3O88705 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hcn3O88705 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Hcn3O88705 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Hcn3O88705 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.93■■□□□ 1.1
Hcn3O88705 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hcn3O88705 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hcn3O88705 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hcn3O88705 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn3O88705 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn3O88705 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Hcn3O88705 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn3O88705 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn3O88705 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn3O88705 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn3O88705 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Hcn3O88705 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hcn3O88705 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hcn3O88705 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hcn3O88705 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Hcn3O88705 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hcn3O88705 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.88■■□□□ 1.09
Hcn3O88705 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn3O88705 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Hcn3O88705 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hcn3O88705 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hcn3O88705 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.86■■□□□ 1.09
Hcn3O88705 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.85■■□□□ 1.09
Hcn3O88705 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn3O88705 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.84■■□□□ 1.09
Hcn3O88705 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.84■■□□□ 1.09
Hcn3O88705 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn3O88705 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.83■■□□□ 1.09
Hcn3O88705 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.83■■□□□ 1.09
Hcn3O88705 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn3O88705 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.08
Hcn3O88705 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hcn3O88705 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Hcn3O88705 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.82■■□□□ 1.08
Hcn3O88705 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Hcn3O88705 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn3O88705 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn3O88705 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn3O88705 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.81■■□□□ 1.08
Hcn3O88705 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.81■■□□□ 1.08
Hcn3O88705 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hcn3O88705 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hcn3O88705 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.8■■□□□ 1.08
Hcn3O88705 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms