Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ercc2O08811 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ercc2O08811 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ercc2O08811 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Ercc2O08811 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Ercc2O08811 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Ercc2O08811 Gm4799-201ENSMUST00000095396 657 ntBASIC23.55■■□□□ 1.36
Ercc2O08811 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ercc2O08811 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ercc2O08811 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.55■■□□□ 1.36
Ercc2O08811 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ercc2O08811 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ercc2O08811 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ercc2O08811 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ercc2O08811 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ercc2O08811 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.53■■□□□ 1.36
Ercc2O08811 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ercc2O08811 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ercc2O08811 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ercc2O08811 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ercc2O08811 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ercc2O08811 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Ercc2O08811 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ercc2O08811 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ercc2O08811 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ercc2O08811 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ercc2O08811 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ercc2O08811 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ercc2O08811 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Ercc2O08811 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ercc2O08811 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ercc2O08811 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.5■■□□□ 1.35
Ercc2O08811 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ercc2O08811 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.5■■□□□ 1.35
Ercc2O08811 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ercc2O08811 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ercc2O08811 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ercc2O08811 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.49■■□□□ 1.35
Ercc2O08811 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ercc2O08811 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ercc2O08811 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ercc2O08811 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ercc2O08811 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ercc2O08811 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.48■■□□□ 1.35
Ercc2O08811 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Ercc2O08811 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.48■■□□□ 1.35
Ercc2O08811 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ercc2O08811 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ercc2O08811 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ercc2O08811 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ercc2O08811 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Ercc2O08811 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.47■■□□□ 1.35
Ercc2O08811 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Ercc2O08811 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ercc2O08811 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ercc2O08811 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ercc2O08811 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ercc2O08811 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.45■■□□□ 1.34
Ercc2O08811 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.45■■□□□ 1.34
Ercc2O08811 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ercc2O08811 Mir3960-201ENSMUST00000198213 73 ntBASIC23.44■■□□□ 1.34
Ercc2O08811 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ercc2O08811 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ercc2O08811 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ercc2O08811 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ercc2O08811 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ercc2O08811 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ercc2O08811 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Ercc2O08811 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ercc2O08811 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ercc2O08811 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ercc2O08811 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.41■■□□□ 1.34
Ercc2O08811 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.4■■□□□ 1.34
Ercc2O08811 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ercc2O08811 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ercc2O08811 Gm45364-201ENSMUST00000210883 159 ntBASIC23.38■■□□□ 1.33
Ercc2O08811 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ercc2O08811 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.37■■□□□ 1.33
Ercc2O08811 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ercc2O08811 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.36■■□□□ 1.33
Ercc2O08811 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.36■■□□□ 1.33
Ercc2O08811 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.35■■□□□ 1.33
Ercc2O08811 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.35■■□□□ 1.33
Ercc2O08811 Gm9812-201ENSMUST00000061934 968 ntBASIC23.35■■□□□ 1.33
Ercc2O08811 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ercc2O08811 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ercc2O08811 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ercc2O08811 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ercc2O08811 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ercc2O08811 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.34■■□□□ 1.33
Ercc2O08811 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ercc2O08811 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ercc2O08811 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ercc2O08811 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.32■■□□□ 1.32
Ercc2O08811 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ercc2O08811 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ercc2O08811 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ercc2O08811 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ercc2O08811 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.32■■□□□ 1.32
Ercc2O08811 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms