Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm20708H3BKF4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm20708H3BKF4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm20708H3BKF4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm20708H3BKF4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm20708H3BKF4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm20708H3BKF4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm20708H3BKF4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm20708H3BKF4 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.43■□□□□ 0.7
Gm20708H3BKF4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm20708H3BKF4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm20708H3BKF4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm20708H3BKF4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.42■□□□□ 0.7
Gm20708H3BKF4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm20708H3BKF4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm20708H3BKF4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm20708H3BKF4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20708H3BKF4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm20708H3BKF4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm20708H3BKF4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm20708H3BKF4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm20708H3BKF4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm20708H3BKF4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gm20708H3BKF4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm20708H3BKF4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm20708H3BKF4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 Gm4799-201ENSMUST00000095396 657 ntBASIC19.37■□□□□ 0.69
Gm20708H3BKF4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm20708H3BKF4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm20708H3BKF4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm20708H3BKF4 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.35■□□□□ 0.69
Gm20708H3BKF4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20708H3BKF4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20708H3BKF4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm20708H3BKF4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20708H3BKF4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm20708H3BKF4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm20708H3BKF4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Gm20708H3BKF4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm20708H3BKF4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm20708H3BKF4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm20708H3BKF4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm20708H3BKF4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm20708H3BKF4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20708H3BKF4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm20708H3BKF4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20708H3BKF4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm20708H3BKF4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm20708H3BKF4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.31■□□□□ 0.68
Gm20708H3BKF4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Gm45364-201ENSMUST00000210883 159 ntBASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm20708H3BKF4 Mir3960-201ENSMUST00000198213 73 ntBASIC19.29■□□□□ 0.68
Gm20708H3BKF4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm20708H3BKF4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20708H3BKF4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20708H3BKF4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm20708H3BKF4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm20708H3BKF4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm20708H3BKF4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm20708H3BKF4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm20708H3BKF4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm20708H3BKF4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm20708H3BKF4 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.25■□□□□ 0.67
Gm20708H3BKF4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm20708H3BKF4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Gm20708H3BKF4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Gm9812-201ENSMUST00000061934 968 ntBASIC19.24■□□□□ 0.67
Gm20708H3BKF4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm20708H3BKF4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms