Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1iE9Q7P2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.97■□□□□ 0.63
Cacna1iE9Q7P2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1iE9Q7P2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1iE9Q7P2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1iE9Q7P2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Cacna1iE9Q7P2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1iE9Q7P2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1iE9Q7P2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1iE9Q7P2 Gm42790-201ENSMUST00000201268 969 ntBASIC18.94■□□□□ 0.62
Cacna1iE9Q7P2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1iE9Q7P2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cacna1iE9Q7P2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1iE9Q7P2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1iE9Q7P2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1iE9Q7P2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1iE9Q7P2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1iE9Q7P2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.92■□□□□ 0.62
Cacna1iE9Q7P2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1iE9Q7P2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Gm44487-201ENSMUST00000205145 325 ntBASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1iE9Q7P2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1iE9Q7P2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1iE9Q7P2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1iE9Q7P2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cacna1iE9Q7P2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1iE9Q7P2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.89■□□□□ 0.62
Cacna1iE9Q7P2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cacna1iE9Q7P2 Gm30023-201ENSMUST00000197970 889 ntBASIC18.89■□□□□ 0.61
Cacna1iE9Q7P2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1iE9Q7P2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1iE9Q7P2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1iE9Q7P2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Gm7332-201ENSMUST00000118351 454 ntBASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1iE9Q7P2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1iE9Q7P2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cacna1iE9Q7P2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.87■□□□□ 0.61
Cacna1iE9Q7P2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1iE9Q7P2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1iE9Q7P2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1iE9Q7P2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1iE9Q7P2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1iE9Q7P2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1iE9Q7P2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1iE9Q7P2 Gm22567-201ENSMUST00000175542 342 ntBASIC18.83■□□□□ 0.61
Cacna1iE9Q7P2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1iE9Q7P2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1iE9Q7P2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1iE9Q7P2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1iE9Q7P2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cacna1iE9Q7P2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1iE9Q7P2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.82■□□□□ 0.6
Cacna1iE9Q7P2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1iE9Q7P2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cacna1iE9Q7P2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1iE9Q7P2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1iE9Q7P2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Gm16437-201ENSMUST00000025669 507 ntBASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Gm4799-201ENSMUST00000095396 657 ntBASIC18.81■□□□□ 0.6
Cacna1iE9Q7P2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1iE9Q7P2 Gm11687-201ENSMUST00000118911 886 ntBASIC18.8■□□□□ 0.6
Cacna1iE9Q7P2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1iE9Q7P2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Cacna1iE9Q7P2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1iE9Q7P2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1iE9Q7P2 Scarna2-201ENSMUST00000157560 414 ntBASIC18.79■□□□□ 0.6
Cacna1iE9Q7P2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1iE9Q7P2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1iE9Q7P2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1iE9Q7P2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1iE9Q7P2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.76■□□□□ 0.59
Cacna1iE9Q7P2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms