Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-20A0A0A6YX66 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-20A0A0A6YX66 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-20A0A0A6YX66 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.58■□□□□ 0.56
Ighv1-20A0A0A6YX66 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 Gm16437-201ENSMUST00000025669 507 ntBASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-20A0A0A6YX66 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-20A0A0A6YX66 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.56■□□□□ 0.56
Ighv1-20A0A0A6YX66 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-20A0A0A6YX66 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-20A0A0A6YX66 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-20A0A0A6YX66 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-20A0A0A6YX66 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.54■□□□□ 0.56
Ighv1-20A0A0A6YX66 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-20A0A0A6YX66 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ighv1-20A0A0A6YX66 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ighv1-20A0A0A6YX66 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.53■□□□□ 0.56
Ighv1-20A0A0A6YX66 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-20A0A0A6YX66 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-20A0A0A6YX66 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.52■□□□□ 0.55
Ighv1-20A0A0A6YX66 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-20A0A0A6YX66 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-20A0A0A6YX66 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-20A0A0A6YX66 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-20A0A0A6YX66 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ighv1-20A0A0A6YX66 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-20A0A0A6YX66 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-20A0A0A6YX66 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-20A0A0A6YX66 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-20A0A0A6YX66 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-20A0A0A6YX66 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.49■□□□□ 0.55
Ighv1-20A0A0A6YX66 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ighv1-20A0A0A6YX66 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.47■□□□□ 0.55
Ighv1-20A0A0A6YX66 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-20A0A0A6YX66 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-20A0A0A6YX66 Terc-201ENSMUST00000082862 423 ntBASIC18.45■□□□□ 0.54
Ighv1-20A0A0A6YX66 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-20A0A0A6YX66 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-20A0A0A6YX66 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ighv1-20A0A0A6YX66 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-20A0A0A6YX66 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-20A0A0A6YX66 Cap2-205ENSMUST00000225824 1634 ntBASIC18.42■□□□□ 0.54
Ighv1-20A0A0A6YX66 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-20A0A0A6YX66 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-20A0A0A6YX66 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-20A0A0A6YX66 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-20A0A0A6YX66 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-20A0A0A6YX66 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-20A0A0A6YX66 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-20A0A0A6YX66 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-20A0A0A6YX66 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-20A0A0A6YX66 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.4■□□□□ 0.54
Ighv1-20A0A0A6YX66 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms