Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv23A0A0A6YWQ1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv23A0A0A6YWQ1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv23A0A0A6YWQ1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv23A0A0A6YWQ1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trbv23A0A0A6YWQ1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trbv23A0A0A6YWQ1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv23A0A0A6YWQ1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv23A0A0A6YWQ1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv23A0A0A6YWQ1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv23A0A0A6YWQ1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv23A0A0A6YWQ1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv23A0A0A6YWQ1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv23A0A0A6YWQ1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trbv23A0A0A6YWQ1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv23A0A0A6YWQ1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv23A0A0A6YWQ1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.64■□□□□ 0.74
Trbv23A0A0A6YWQ1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv23A0A0A6YWQ1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv23A0A0A6YWQ1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv23A0A0A6YWQ1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.63■□□□□ 0.73
Trbv23A0A0A6YWQ1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trbv23A0A0A6YWQ1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv23A0A0A6YWQ1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv23A0A0A6YWQ1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv23A0A0A6YWQ1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv23A0A0A6YWQ1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv23A0A0A6YWQ1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv23A0A0A6YWQ1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv23A0A0A6YWQ1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Trbv23A0A0A6YWQ1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv23A0A0A6YWQ1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv23A0A0A6YWQ1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.58■□□□□ 0.73
Trbv23A0A0A6YWQ1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trbv23A0A0A6YWQ1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv23A0A0A6YWQ1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv23A0A0A6YWQ1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv23A0A0A6YWQ1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv23A0A0A6YWQ1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv23A0A0A6YWQ1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.57■□□□□ 0.72
Trbv23A0A0A6YWQ1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv23A0A0A6YWQ1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trbv23A0A0A6YWQ1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv23A0A0A6YWQ1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv23A0A0A6YWQ1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv23A0A0A6YWQ1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv23A0A0A6YWQ1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv23A0A0A6YWQ1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trbv23A0A0A6YWQ1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv23A0A0A6YWQ1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv23A0A0A6YWQ1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv23A0A0A6YWQ1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv23A0A0A6YWQ1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv23A0A0A6YWQ1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv23A0A0A6YWQ1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv23A0A0A6YWQ1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv23A0A0A6YWQ1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv23A0A0A6YWQ1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv23A0A0A6YWQ1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv23A0A0A6YWQ1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv23A0A0A6YWQ1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.51■□□□□ 0.71
Trbv23A0A0A6YWQ1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv23A0A0A6YWQ1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv23A0A0A6YWQ1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv23A0A0A6YWQ1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv23A0A0A6YWQ1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Trbv23A0A0A6YWQ1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 181.4 ms