RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 EFL1Q7Z2Z2 1120 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SYVN1Q86TM6 617 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 AMZ2Q86W34 360 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SLC22A15Q8IZD6 547 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 DCBLD1Q8N8Z6 715 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CEP70Q8NHQ1 597 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 HM13Q8TCT9 377 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TWIST2Q8WVJ9 160 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 ASB11Q8WXH4 323 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 RHBDF1Q96CC6 855 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 MARK4Q96L34 752 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CATSPER2Q96P56 530 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CDK15Q96Q40 435 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 LGR4Q9BXB1 951 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SLC12A9Q9BXP2 914 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CD244Q9BZW8 370 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 BTBD1Q9H0C5 482 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 EFCAB1Q9HAE3 211 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 MEAF6Q9HAF1 191 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CD93Q9NPY3 652 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM45AQ9NWC5 275 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CIDEBQ9UHD4 219 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PSMD13Q9UNM6 376 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 GPR34Q9UPC5 381 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 BTRCQ9Y297 605 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 MRPS17Q9Y2R5 130 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 ASB1Q9Y576 335 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TIMM22Q9Y584 194 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 KRT87PA6NCN2 255 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MGAT4DA6NG13 374 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ARHGEF33A8MVX0 844 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 H0YJX3 145 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 GFYI3L273 518 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CACNB4O00305 520 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 FPGTO14772 594 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 KMOO15229 486 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 LILRB5O75023 590 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 STK16O75716 305 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ESRRBO95718 433 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OTCP00480 354 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 FGF4P08620 206 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 LINC00032P0C843 101 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 UROSP10746 265 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MYCLP1P12525 358 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 EPB42P16452 691 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PDHA2P29803 388 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PRDX3P30048 256 aaKnown RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ACSL1P33121 698 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 IGFALSP35858 605 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 GDF5P43026 501 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MAPK9P45984 424 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 HSPA13P48723 471 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PIK3CGP48736 1102 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ACADVLP49748 655 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CCR3P51677 355 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 DGKEP52429 567 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 FOXA1P55317 472 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SH3BGRP55822 239 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 AP1S2P56377 157 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SLC25A3Q00325 362 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CDKL1Q00532 357 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PRKCQQ04759 706 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 TSTA3Q13630 321 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CYLC2Q14093 348 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 NFE2L1Q14494 772 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SQLEQ14534 574 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 AGERQ15109 404 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MAP7D1Q3KQU3 841 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PIGGQ5H8A4 983 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OGFRL1Q5TC84 451 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 KANK2Q63ZY3 851 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 NEK5Q6P3R8 708 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SCIMPQ6UWF3 145 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MILR1Q7Z6M3 343 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 PDSS2Q86YH6 399 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ZNF547Q8IVP9 402 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 DEFB107AQ8IZN7 70 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CHCHD4Q8N4Q1 142 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 CDYL2Q8N8U2 506 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OR52B6Q8NGF0 335 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OR2T34Q8NGX1 318 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OR2L2Q8NH16 312 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 UBTD2Q8WUN7 234 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 C19orf60Q96EN9 201 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 MED8Q96G25 268 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 DUS3LQ96G46 650 aaKnown RBP8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SHDQ96IW2 340 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ZNF382Q96SR6 550 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM79Q9BSE2 394 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 APOOQ9BUR5 198 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 TEX101Q9BY14 249 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 ATG10Q9H0Y0 220 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 OSGEPL1Q9H4B0 414 aa8.63□□□□□ -1.03
PHGDH-219ENST00000641513 SLC32A1Q9H598 525 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms