RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 AQP12BA6NM10 295 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 EDNRBP24530 442 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 PEX2P28328 305 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 HCAR3P49019 387 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 OSTM1Q86WC4 334 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 AQP12AQ8IXF9 295 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 OR10H5Q8NGA6 315 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 FCRL5Q96RD9 977 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC35C2Q9NQQ7 365 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-216ENST00000591545 UBXN7O94888 489 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 PGRP06401 933 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 CD48P09326 243 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 VIPR1P32241 457 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MLLT6P55198 1093 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RALGPS1Q5JS13 557 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ALKBH2Q6NS38 261 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 LAPTM4BQ86VI4 370 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 SUN3Q8TAQ9 357 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 HTRA1Q92743 480 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 AZIN2Q96A70 460 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 NSUN3Q9H649 340 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 UPK3BL1B0FP48 263 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 TMEM150CB9EJG8 249 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 UPK3BL2E5RIL1 263 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 METTL18O95568 372 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MYLK3Q32MK0 819 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 GALNT5Q7Z7M9 940 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 LRRTM4Q86VH4 590 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC43A3Q8NBI5 491 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF354BQ96LW1 612 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF347Q96SE7 839 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RMI1Q9H9A7 625 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 INTS10Q9NVR2 710 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 TAS2R7Q9NYW3 318 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 DNAJB9Q9UBS3 223 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 POMPQ9Y244 141 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 PKD1L3Q7Z443 1732 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF879B4DU55 563 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 CCNB2O95067 398 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 IFNA6P05013 189 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF30P17039 623 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 VBP1P61758 197 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 GTF2H2Q13888 395 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 FSTL4Q6MZW2 842 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 GTF2H2CQ6P1K8 395 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RALGPS2Q86X27 583 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ZCCHC10Q8TBK6 192 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 C5orf34Q96MH7 638 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MED28Q9H204 178 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MAFFQ9ULX9 164 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 ERVK-11Q9UQG0 969 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RIIAD1A6NNX1 92 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 IQCF5A8MTL0 148 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 RAP2AP10114 183 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 PIM1P11309 404 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MSX2P35548 267 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 CTSOP43234 321 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 MAPK12P53778 367 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 DCAF4L2Q8NA75 395 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
SMARCA4-216ENST00000591545 GABRDO14764 452 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 AP2A2O94973 939 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 H6PDO95479 791 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 DUSP3P51452 185 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CHIT1Q13231 466 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 MORN1Q5T089 497 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 PHF19Q5T6S3 580 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 LDB1Q86U70 411 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 JAZF1Q86VZ6 243 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 PIGXQ8TBF5 258 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 LRTOMTQ8WZ04 291 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 RIOK2Q9BVS4 552 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ELL3Q9HB65 397 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 OAS3Q9Y6K5 1087 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ANXA4P09525 319 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 DLDP09622 509 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 UNGP13051 313 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CHRNB2P17787 502 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CASRP41180 1078 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms