RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PEX2P28328 305 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 PTPN7P35236 360 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ATP5OP48047 213 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 MARCKSL1P49006 195 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 AGFG1P52594 562 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 RWDD2BP57060 319 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 HHEXQ03014 270 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 C16orf72Q14CZ0 275 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 NOMO1Q15155 1222 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 SIRPB2Q5JXA9 342 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 FAM182AQ5T1J6 154 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ALS2CLQ60I27 953 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ITPRIPL1Q6GPH6 555 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 INO80CQ6PI98 192 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 WDR74Q6RFH5 385 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 PHYKPLQ8IUZ5 450 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 TXLNBQ8N3L3 684 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 AGBL5Q8NDL9 886 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 RAX2Q96IS3 184 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 PPP1R2P1Q96PQ5 205 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 CCNL2Q96S94 520 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 NUDT22Q9BRQ3 303 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 OSBPL8Q9BZF1 889 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 OR2AG1Q9H205 316 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 CPNE5Q9HCH3 593 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 RSPH14Q9UHP6 348 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 KCNK6Q9Y257 313 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 AAR2Q9Y312 384 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 ATP23Q9Y6H3 246 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.86
HNRNPC-228ENST00000557033 SCN8AQ9UQD0 1980 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM82A0PJX8 343 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 C9orf172C9J069 976 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 DUX1O43812 170 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CDK14O94921 469 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 SLC4A1P02730 911 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 LIPCP11150 499 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 XRCC1P18887 633 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ITIH1P19827 911 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 RBL1P28749 1068 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 SDHAP31040 664 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 PIK3CBP42338 1070 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 VAV2P52735 878 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 MAPK10P53779 464 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 GEMP55040 296 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CFHR1Q03591 330 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 TMEM115Q12893 351 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 PRPSAP1Q14558 356 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 PDCD2Q16342 344 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ATP13A5Q4VNC0 1218 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ARHGAP40Q5TG30 622 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 NKAIN2Q5VXU1 208 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ABRAXAS1Q6UWZ7 409 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 WASH2PQ6VEQ5 465 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ESPNLQ6ZVH7 1005 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 LRRTM4Q86VH4 590 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 FAM20CQ8IXL6 584 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ARMC10Q8N2F6 343 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 TTC30BQ8N4P2 665 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 ACTL9Q8TC94 416 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 HAUS1Q96CS2 278 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 OXNAD1Q96HP4 312 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 BAG1Q99933 345 aaPredicted RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 TIMM29Q9BSF4 260 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CD244Q9BZW8 370 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 UCK1Q9HA47 277 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 BPIFA1Q9NP55 256 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 IL26Q9NPH9 171 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 WASH6PQ9NQA3 447 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 KLC4Q9NSK0 619 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 IL17CQ9P0M4 197 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 IMPACTQ9P2X3 320 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 CPNE7Q9UBL6 633 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 REXO2Q9Y3B8 237 aaKnown RBP9.64□□□□□ -0.87
HNRNPC-228ENST00000557033 PRAMEF33A0A0G2JMD5 474 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 C5orf60A6NFR6 353 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 B4E171 279 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 C22orf46C9J442 243 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 SNX2O60749 519 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 PRAMEF10O60809 474 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 THRAP10827 490 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 FGF3P11487 239 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CCL4P13236 92 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ZNF7P17097 686 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 VCLP18206 1134 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 IDSP22304 550 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 SPAM1P38567 509 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 ETV5P41161 510 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 TSPAN7P41732 249 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 CHRNA4P43681 627 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 PRIM2P49643 509 aa9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 EIF3EP60228 445 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-228ENST00000557033 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms