RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TUBB8Q3ZCM7 444 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ATG9BQ674R7 924 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 DENND5AQ6IQ26 1287 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TTI2Q6NXR4 508 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 FOXD4L3Q6VB84 417 aaPredicted RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CERS6Q6ZMG9 384 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 KRBA2Q6ZNG9 492 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ENOSF1Q7L5Y1 443 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ARCQ7LC44 396 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TRIM74Q86UV6 250 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 OOSP2Q86WS3 158 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CDC20BQ86Y33 519 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 KBTBD2Q8IY47 623 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 GHDCQ8N2G8 530 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 BBS5Q8N3I7 341 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 BEND7Q8N7W2 519 aaPredicted RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 RTL3Q8N8U3 475 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 OR1L3Q8NH93 324 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 FNIP1Q8TF40 1166 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 SCAMP4Q969E2 229 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PAGE5Q96GU1 130 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 KREMEN1Q96MU8 473 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 GPR137Q96N19 417 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF396Q96N95 335 aaPredicted RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TSG101Q99816 390 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 RIOK2Q9BVS4 552 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 NAA15Q9BXJ9 866 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ASPNQ9BXN1 380 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PDCL3Q9H2J4 239 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 FAM83DQ9H4H8 585 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 SLC6A20Q9NP91 592 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 C1GALT1Q9NS00 363 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TXLNGQ9NUQ3 528 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TAS2R14Q9NYV8 317 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PLA2G3Q9NZ20 509 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CD84Q9UIB8 345 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TEKT2Q9UIF3 430 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 MTMR6Q9Y217 621 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PPIL1Q9Y3C6 166 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TRAF6Q9Y4K3 522 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PCDHA9Q9Y5H5 950 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 AKAP9Q99996 3911 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 GSAPA4D1B5 854 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 MEGF11A6BM72 1044 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 NPIPA5E9PKD4 350 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 FAM227AF5H4B4 570 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 SLC16A3O15427 465 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 KLK8O60259 260 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ADAM11O75078 769 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 SLC25A14O95258 325 aaPredicted RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 LCA5LO95447 670 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 PRAMEF1O95521 474 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CBSLP0DN79 551 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 BRAFP15056 766 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 MX2P20592 715 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 RPL10P27635 214 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CBSP35520 551 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 USP8P40818 1118 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 KIR2DL3P43628 341 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 MAP2K3P46734 347 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 FMO5P49326 533 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 GPR85P60893 370 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 GUCY1A3Q02108 690 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 OLIG2Q13516 323 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 GALEQ14376 348 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 RBBP7Q16576 425 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 SLC5A12Q1EHB4 618 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 NKAIN1Q4KMZ8 207 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 TDRD12Q587J7 1177 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 RALGPS1Q5JS13 557 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ARTNQ5T4W7 220 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 FAM102AQ5T9C2 384 aaPredicted RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ARMC12Q5T9G4 340 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 MANEALQ5VSG8 457 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 OTUD1Q5VV17 481 aaPredicted RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 RHBDD2Q6NTF9 364 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 TLDC1Q6P9B6 456 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 KIRREL2Q6UWL6 708 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ARSKQ6UWY0 536 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 PRSS57Q6UWY2 283 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CEP128Q6ZU80 1094 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ACAD11Q709F0 780 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 PCGF5Q86SE9 256 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 HOOK3Q86VS8 718 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 WFDC8Q8IUA0 241 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CPSF7Q8N684 471 aaKnown RBP4.97□□□□□ -1.61
CKAP4-203ENST00000553039 LINC00301Q8NCQ3 95 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 TMEM35BQ8NCS4 154 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 MSANTD4Q8NCY6 345 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 ADCY4Q8NFM4 1077 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 CCHCR1Q8TD31 782 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 LRRC46Q96FV0 321 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 COX4I2Q96KJ9 171 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 DMRTA2Q96SC8 542 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 TLR10Q9BXR5 811 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 TMPRSS13Q9BYE2 586 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 UCK2Q9BZX2 261 aa4.97□□□□□ -1.61
CKAP4-203ENST00000553039 KLC2Q9H0B6 622 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms