RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MAGEE1Q9HCI5 957 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ABCB8Q9NUT2 735 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TMEM181Q9P2C4 612 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DNAJC15Q9Y5T4 150 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 U3KQV3 271 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ANKDD1BA6NHY2 528 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 SOCS2O14508 198 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PCDH8O95206 1070 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MATN4O95460 622 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ASLP04424 464 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 EBLN1P0CF75 366 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MYCLP1P12525 358 aaPredicted RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 CXCR2P25025 360 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CLCN4P51793 760 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PNLIPRP1P54315 467 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ALDH6A1Q02252 535 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 SP140Q13342 867 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TUBB3Q13509 450 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DGCR6Q14129 220 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 C5orf22Q49AR2 442 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PSAPL1Q6NUJ1 521 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CCDC36Q8IYA8 594 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DCAF4L2Q8NA75 395 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 GOLM1Q8NBJ4 401 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 OR13J1Q8NGT2 312 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 WDR36Q8NI36 951 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 STON2Q8WXE9 905 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 FATE1Q969F0 183 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CEP295NLQ96MC4 621 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 RTP3Q9BQQ7 232 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ARHGAP39Q9C0H5 1083 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 SLC32A1Q9H598 525 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TRPS1Q9UHF7 1281 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CLCA2Q9UQC9 943 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PDE10AQ9Y233 779 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DHRS7Q9Y394 339 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CLDN7O95471 211 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 NTRK1P04629 796 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 C7P10643 843 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CCR3P51677 355 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ADAM17P78536 824 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MS4A2Q01362 244 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CHIT1Q13231 466 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LAPTM5Q13571 262 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LDLRAP1Q5SW96 308 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 GCNT6Q5T4J0 391 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 OR52E8Q6IFG1 317 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 EIF3MQ7L2H7 374 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 ANKRD46Q86W74 232 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LSMEM2Q8N112 164 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PIK3C3Q8NEB9 887 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 OR8J3Q8NGG0 315 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 FBXL20Q96IG2 436 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DEFB118Q96PH6 123 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 HTATIP2Q9BUP3 242 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PTBP2Q9UKA9 531 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 GSTK1Q9Y2Q3 226 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 KCNE2Q9Y6J6 123 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 SMCHD1A6NHR9 2005 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 KAT6AQ92794 2004 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LOC285095A0A1B0GVY8 99 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 GALTP07902 379 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT1A6P19224 532 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT1A1P22309 533 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT1A4P22310 534 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 HTR1EP28566 365 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT1A3P35503 534 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT1A5P35504 534 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 DGKQP52824 942 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 DIO3P55073 304 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TGM3Q08188 693 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PLA2G4EQ3MJ16 856 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 LCN8Q6JVE9 175 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 MED27Q6P2C8 311 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TRIM40Q6P9F5 258 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CRTC3Q6UUV7 619 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 UGT2A3Q6UWM9 527 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CHSY3Q70JA7 882 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TMPRSS11BQ86T26 416 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SCLYQ96I15 445 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ATG10Q9H0Y0 220 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 FAM83DQ9H4H8 585 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ARNT2Q9HBZ2 717 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CLN6Q9NWW5 311 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 OSER1Q9NX31 292 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TBC1D14Q9P2M4 693 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TRPC4Q9UBN4 977 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SRRDQ9UH36 339 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PCTPQ9UKL6 214 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 RNF11Q9Y3C5 154 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ASB3Q9Y575 518 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PCDHB3Q9Y5E6 796 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 H3BNH8 94 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 AURKAO14965 403 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 BMP10O95393 424 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 FGF4P08620 206 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PRSS56P0CW18 603 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 EPORP19235 508 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 AFF1P51825 1210 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms