RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ACBD3Q9H3P7 528 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MTHFD2LQ9H903 347 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ATP6V0A4Q9HBG4 840 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NECTIN3Q9NQS3 549 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SIRT7Q9NRC8 400 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PIGVQ9NUD9 493 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 C14orf119Q9NWQ9 140 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SOHLH2Q9NX45 425 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CISD1Q9NZ45 108 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PTTG2Q9NZH5 202 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KLHL21Q9UJP4 597 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FBXL5Q9UKA1 691 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC7A7Q9UM01 511 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CAPN11Q9UMQ6 739 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DUSP12Q9UNI6 340 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NFE2L3Q9Y4A8 694 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 YIPF1Q9Y548 306 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 COPG1Q9Y678 874 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CACNG2Q9Y698 323 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TEX264Q9Y6I9 313 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 IVNS1ABPQ9Y6Y0 642 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FER1L5A0AVI2 2057 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TTC28Q96AY4 2481 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZSWIM8A7E2V4 1837 aa-0.92□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RPAP1Q9BWH6 1393 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TENM2Q9NT68 2774 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 IGHV3-35A0A0C4DH35 117 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SYNDIG1LA6NDD5 238 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TRIM75PA6NK02 468 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CCT8L1PA6NM43 557 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ARHGEF33A8MVX0 844 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PDHXO00330 501 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EBAG9O00559 213 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OFD1O75665 1012 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RFPL3O75679 317 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DFFBO76075 338 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MTA2O94776 668 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 UBXN7O94888 489 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ACSL3O95573 720 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FGRP09769 529 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RHOXF2BP0C7M4 288 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 THRBP10828 461 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 G6PDP11413 515 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PECAM1P16284 738 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MAOAP21397 527 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CA6P23280 308 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GSTM2P28161 218 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ACVR1BP36896 505 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SKIV2L2P42285 1042 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FNTAP49354 379 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RIDAP52758 137 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NDST1P52848 882 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 THOP1P52888 689 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CDH11P55287 796 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SRPXP78539 464 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CXCL6P80162 114 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 COG7P83436 770 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PRKCZQ05513 592 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KCNA1Q09470 495 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DAZ2Q13117 558 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MADCAM1Q13477 382 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GGTLC2Q14390 218 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ARHGEF6Q15052 776 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PCBP1Q15365 356 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SOWAHAQ2M3V2 549 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EIF2S3LQ2VIR3 472 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ESCO2Q56NI9 601 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NHSL2Q5HYW2 709 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TMEM198Q66K66 360 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ANKRD54Q6NXT1 300 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RPUSD3Q6P087 351 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KLC3Q6P597 504 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EMBQ6PCB8 327 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CCDC174Q6PII3 467 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 IL34Q6ZMJ4 242 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 UNC13DQ70J99 1090 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EPM2AIP1Q7L775 607 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RNF144BQ7Z419 303 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GPR180Q86V85 440 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MICU3Q86XE3 530 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 VPS37DQ86XT2 251 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PPM1KQ8N3J5 372 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CPXM2Q8N436 756 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PARP16Q8N5Y8 322 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SCAIQ8N9R8 606 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ACVR1CQ8NER5 493 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GPRC5AQ8NFJ5 357 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR2L3Q8NG85 312 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR10G2Q8NGC3 310 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR6X1Q8NH79 312 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CFAP61Q8NHU2 1237 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 C9orf43Q8TAL5 461 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SNAPC3Q92966 411 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NSL1Q96IY1 281 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CCT8L2Q96SF2 557 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 BUD13Q9BRD0 619 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NUDT22Q9BRQ3 303 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 WRAP53Q9BUR4 548 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KATNAL1Q9BW62 490 aa-0.93□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PLA2G2FQ9BZM2 168 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms