RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 EFTUD2Q15029 972 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 GRTP1Q5TC63 336 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FBXO38Q6PIJ6 1188 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 TMEM207Q6UWW9 146 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 LINC01555Q8NAE3 123 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 KLHL6Q8WZ60 621 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 PPM1MQ96MI6 270 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 CD180Q99467 661 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 RBBP8Q99708 897 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
COL1A1-208ENST00000494334 ASCL3Q9NQ33 180 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 SPHK1Q9NYA1 384 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 ACTR10Q9NZ32 417 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 POMT2Q9UKY4 750 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
COL1A1-208ENST00000494334 TLCD2A6NGC4 264 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 ZBTB14O43829 449 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 ACSL3O95573 720 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 CHRM5P08912 532 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 MYBL2P10244 700 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 PEBP1P30086 187 aaKnown RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 SPRP35270 261 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 MAPK10P53779 464 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 IL2P60568 153 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 NAB1Q13506 487 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 CEP97Q8IW35 865 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 C2orf73Q8N5S3 287 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 BMPERQ8N8U9 685 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 KDF1Q8NAX2 398 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 FBXO15Q8NCQ5 510 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-208ENST00000494334 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 OR2L8Q8NGY9 312 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 UBXN4Q92575 508 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 DLG3Q92796 817 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 SLC41A2Q96JW4 573 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 OR2A14Q96R47 310 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 CYTH2Q99418 400 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 GPR22Q99680 433 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 ACSS3Q9H6R3 686 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
COL1A1-208ENST00000494334 KIF26BQ2KJY2 2108 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ISM1B1AKI9 464 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 B4E171 279 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 MYO1CO00159 1063 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 TAF4O00268 1085 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 UGT2B7P16662 529 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ZNF37AP17032 561 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 NELFEP18615 380 aaKnown RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 CDH3P22223 829 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 TSPAN7P41732 249 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ERVPABLB-1P60509 514 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 SH3BP2P78314 561 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 MC2RQ01718 297 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 POU4F1Q01851 419 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ZNF460Q14592 562 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 TBC1D25Q3MII6 688 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 SPESP1Q6UW49 350 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 CARFQ8N187 725 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 MYO1HQ8N1T3 1032 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 RAB42Q8N4Z0 105 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 USP7Q93009 1102 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 MRRFQ96E11 262 aaKnown RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 PDLIM5Q96HC4 596 aaKnown RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 PKP4Q99569 1192 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 RAB11FIP5Q9BXF6 653 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 PITPNM3Q9BZ71 974 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 CAB39LQ9H9S4 337 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 SYTL2Q9HCH5 934 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 C1GALT1Q9NS00 363 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 SIDT1Q9NXL6 827 aaKnown RBP13.1□□□□□ -0.31
COL1A1-208ENST00000494334 SPATA7Q9P0W8 599 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 ADAMTS6Q9UKP5 1117 aa13.1□□□□□ -0.31
COL1A1-208ENST00000494334 TMEM8BA6NDV4 472 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 SLC9B1P1A6NJY1 282 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 C9orf172C9J069 976 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 SLC16A5O15375 505 aa13.09□□□□□ -0.31
COL1A1-208ENST00000494334 TLX3O43711 291 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-208ENST00000494334 PRICKLE3O43900 615 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms