RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ABCE1P61221 599 aaKnown RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 NAA20P61599 178 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 OCRLQ01968 901 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 PRKG2Q13237 762 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 KRT33BQ14525 404 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 KIR2DS5Q14953 304 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 SHBQ15464 509 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ANKS6Q68DC2 871 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 METTL2BQ6P1Q9 378 aaKnown RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 SLC23A3Q6PIS1 610 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 AGTRAPQ6RW13 159 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 FRMD7Q6ZUT3 714 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 KLHDC8AQ8IYD2 350 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 FAM46DQ8NEK8 389 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF483Q8TF39 744 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ESAMQ96AP7 390 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CXorf40BQ96DE9 158 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 MOCOSQ96EN8 888 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CNDP1Q96KN2 507 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CAMK1GQ96NX5 476 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF317Q96PQ6 595 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 TRMOQ9BU70 441 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CD244Q9BZW8 370 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 DRC3Q9H069 523 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 GSTO2Q9H4Y5 243 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 KIR3DX1Q9H7L2 352 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 FSCN3Q9NQT6 498 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 UCKL1Q9NWZ5 548 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 SPATA7Q9P0W8 599 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 PCTPQ9UKL6 214 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 RAB23Q9ULC3 237 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 PLAGL1Q9UM63 463 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 SLC6A14Q9UN76 642 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 DOLKQ9UPQ8 538 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 PCDHGA5Q9Y5G8 931 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CSNK1G3Q9Y6M4 447 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 COLEC10Q9Y6Z7 277 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 ZFC3H1O60293 1989 aaKnown RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-231ENST00000494043 CACNA1EQ15878 2313 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 SDK1Q7Z5N4 2213 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 FANCMQ8IYD8 2048 aa11.08□□□□□ -0.64
MCF2L-231ENST00000494043 FRYLO94915 3013 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 A0A1B0GTQ1 180 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SRRM3A6NNA2 597 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 B4DGG1 531 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 E2F3O00716 465 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 YKT6O15498 198 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ITM2AO43736 263 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 KDM1AO60341 852 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 DFNA5O60443 496 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 CCNT2O60583 730 aaKnown RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 LYPLA1O75608 230 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 STK16O75716 305 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 HSPA4LO95757 839 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ANXA6P08133 673 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 VIMP08670 466 aaKnown RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ERGP11308 486 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 XRCC1P18887 633 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 EPHA8P29322 1005 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ARRB2P32121 409 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 HSD17B2P37059 387 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 MPLP40238 635 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SLC19A1P41440 591 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 CCR10P46092 362 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SLC1A6P48664 564 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PNLIPRP1P54315 467 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 UBE2IP63279 158 aaKnown RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ARHGAP19Q14CB8 494 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ZXDCQ2QGD7 858 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 HLA-BQ31612 363 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PTCHD3Q3KNS1 767 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 TRIM61Q5EBN2 209 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 IL27RAQ6UWB1 636 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 FAM47EQ6ZV65 393 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 RPS27LQ71UM5 84 aaKnown RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 TRIM48Q8IWZ4 208 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 NAGSQ8N159 534 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SFRP1Q8N474 314 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 OR56A3Q8NH54 315 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SLC37A2Q8TED4 501 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PPP4R1Q8TF05 950 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF480Q8WV37 535 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PATE1Q8WXA2 126 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 CHMP6Q96FZ7 201 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 C7orf26Q96N11 449 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 NSUN5Q96P11 429 aaKnown RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SORT1Q99523 831 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PRRX2Q99811 253 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 MENTQ9BUN1 341 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 RAB11FIP5Q9BXF6 653 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 PITPNM3Q9BZ71 974 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ATG10Q9H0Y0 220 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-231ENST00000494043 SLCO1B3Q9NPD5 702 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms