RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LUZP4Q9P127 313 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 TDRKHQ9Y2W6 561 aaKnown RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 PRRC2CQ9Y520 2896 aaKnown RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 HEATR9A2RTY3 570 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 KRT87PA6NCN2 255 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ERI2A8K979 691 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TCP11X1B4DZS4 312 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PSMD3O43242 534 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PRICKLE3O43900 615 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 NRP2O60462 931 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SEMA7AO75326 666 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF189O75820 626 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SLCO2B1O94956 709 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MED26O95402 600 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 IFNB1P01574 187 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 FTH1P02794 183 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PTMAP06454 111 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 UMODP07911 640 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 OR56A5P0C7T3 313 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MAGP20916 626 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ADRA1DP25100 572 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ARNTP27540 789 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 AOAHP28039 575 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SHMT2P34897 504 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 RPL22P35268 128 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 GRIA3P42263 894 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PGDP52209 483 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 CRADDP78560 199 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 HSPA14Q0VDF9 509 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SSPNQ14714 243 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SLC9A5Q14940 896 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 INPP5JQ15735 1006 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 KYNUQ16719 465 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SLC5A12Q1EHB4 618 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PLEKHN1Q494U1 663 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 CCSMST1Q4G0I0 132 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 CRB2Q5IJ48 1285 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 DCAF10Q5QP82 559 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MLIPQ5VWP3 458 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 FCRL6Q6DN72 434 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MED25Q71SY5 747 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 PPP1R32Q7Z5V6 425 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MRGPREQ86SM8 312 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MCATQ8IVS2 390 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SPNS2Q8IVW8 549 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 DTWD1Q8N5C7 304 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 RNF10Q8N5U6 811 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TMEM102Q8N9M5 508 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 DNAAF3Q8N9W5 541 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SPC24Q8NBT2 197 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 CPT1CQ8TCG5 803 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SGSM3Q96HU1 749 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 IL17FQ96PD4 163 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 DPH2Q9BQC3 489 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 MESP1Q9BRJ9 268 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 P2RY12Q9H244 342 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 FANCEQ9HB96 536 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ZBTB20Q9HC78 741 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-207ENST00000475549 RAB6BQ9NRW1 208 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TREX1Q9NSU2 369 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 POLG2Q9UHN1 485 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 RIMKLBQ9ULI2 386 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF148Q9UQR1 794 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TCAF1Q9Y4C2 921 aa6.76□□□□□ -1.33
HDAC3-207ENST00000475549 TEX15Q9BXT5 2789 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 A0A0J9YY10 115 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 BLACEA4D250 179 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ISM1B1AKI9 464 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 QSOX1O00391 747 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ZSCAN9O15535 394 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 KRT86O43790 486 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 CTSVO60911 334 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ONECUT2O95948 504 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 APRTP07741 180 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 HBQ1P09105 142 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 GP1BBP13224 206 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 AGXTP21549 392 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 CD9P21926 228 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 MCM3P25205 808 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 NMBRP28336 390 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 PKLRP30613 574 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 OTX2P32243 289 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 FDFT1P37268 417 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 RAB28P51157 221 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 DCDP81605 110 aaKnown RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 PLOD1Q02809 727 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 MRPL49Q13405 166 aaKnown RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 KIR2DS3Q14952 304 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 NKAIN1Q4KMZ8 207 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 DNAJC21Q5F1R6 531 aaKnown RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 LYPLAL1Q5VWZ2 237 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 SLC6A19Q695T7 634 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 TLDC1Q6P9B6 456 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF449Q6P9G9 518 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms