RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 TRIM40Q6P9F5 258 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CEACAM20Q6UY09 585 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PPP1R3BQ86XI6 285 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 SELENOMQ8WWX9 145 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 JADE3Q92613 823 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ALG14Q96F25 216 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 GORASP1Q9BQQ3 440 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CCDC86Q9H6F5 360 aaKnown RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 GPN2Q9H9Y4 310 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 NINJ2Q9NZG7 142 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 TMCO1Q9UM00 188 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 C15orf41Q9Y2V0 281 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 TCRBV9S1A1TA0A576 114 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 EFCAB7A8K855 629 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 TMEM63AO94886 807 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 UBXN7O94888 489 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ITGA2BP08514 1039 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 GUCY1A3Q02108 690 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 OC90Q02509 493 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 NHLH1Q02575 133 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CYP4F3Q08477 520 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PPP4R4Q6NUP7 873 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 MREGQ8N565 214 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ANKS4BQ8N8V4 417 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PLA2G15Q8NCC3 412 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 NAT14Q8WUY8 206 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 FATE1Q969F0 183 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 FUBP1Q96AE4 644 aaKnown RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ROPN1BQ9BZX4 212 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 EBF2Q9HAK2 575 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ROPN1Q9HAT0 212 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 NLGN3Q9NZ94 848 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 LCTP09848 1927 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CAPN5O15484 640 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 SGTAO43765 313 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 ATP6V1G2O95670 118 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 SF3A3Q12874 501 aaKnown RBP eCLIP9.04□□□□□ -0.961e-8■■■□□ 19.1
DDX39B-215ENST00000462256 SLC14A1Q13336 389 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PACS1Q6VY07 963 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 TMEM26Q6ZUK4 368 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 CCDC121Q6ZUS5 278 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PTGR2Q8N8N7 351 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 BBS4Q96RK4 519 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 KIFC1Q9BW19 673 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 FAIM2Q9BWQ8 316 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 MRPL46Q9H2W6 279 aaKnown RBP9.04□□□□□ -0.96
DDX39B-215ENST00000462256 PLAGL1Q9UM63 463 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 NENFQ9UMX5 172 aa9.04□□□□□ -0.96
DDX39B-215ENST00000462256 LOC285095A0A1B0GVY8 99 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 NPEPPSL1A6NEC2 478 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CSO75390 466 aaKnown RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 HAUS5O94927 633 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CBSLP0DN79 551 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 KRT4P19013 534 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CBSP35520 551 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 BDKRB1P46663 353 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 RAB28P51157 221 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 COPAP53621 1224 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 PTSQ03393 145 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 TUBB3Q13509 450 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 MAP7Q14244 749 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 TBC1D21Q8IYX1 336 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 ARL8AQ96BM9 186 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 PARVBQ9HBI1 364 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 SNX6Q9UNH7 406 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 ENTPD4Q9Y227 616 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CSNK1G3Q9Y6M4 447 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 RNF215Q9Y6U7 377 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 PIAS1O75925 651 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CSF2P04141 144 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CPA3P15088 417 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 FUT4P22083 530 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 MAPK1P28482 360 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 LSP1P33241 339 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CCR8P51685 355 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 PAQR3Q6TCH7 311 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 PIWIL4Q7Z3Z4 852 aaKnown RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CHCHD4Q8N4Q1 142 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 KCTD4Q8WVF5 259 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 TRPC4Q9UBN4 977 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 HMGB1P1B2RPK0 211 aaPredicted RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 AURKAO14965 403 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 GLB1P16278 677 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 LHCGRP22888 699 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CTSCP53634 463 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 STX3Q13277 289 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 ELOAQ14241 798 aaKnown RBP9.03□□□□□ -0.96
DDX39B-215ENST00000462256 CYP1B1Q16678 543 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 DUPD1Q68J44 220 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 SPATA6LQ8N4H0 392 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 SLC37A2Q8TED4 501 aa9.03□□□□□ -0.96
DDX39B-215ENST00000462256 KCNJ9Q92806 393 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms