RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 HIPK3Q9H422 1215 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 FLRT1Q9NZU1 646 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 A0A1W2PRQ8 180 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ISPDA4D126 451 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SCNN1GP51170 649 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TMEM145Q8NBT3 493 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 AURKBQ96GD4 344 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 MRIQ9BWK5 157 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CLCA1A8K7I4 914 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 KCNU1A8MYU2 1149 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SLC19A2O60779 497 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 POP4O95707 220 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CD36P16671 472 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 GLP1RP43220 463 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CAV3P56539 151 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 MAD2L1BPQ15013 274 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 PRPF38BQ5VTL8 546 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SCIMPQ6UWF3 145 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ZSCAN4Q8NAM6 433 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ING5Q8WYH8 240 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF700Q9H0M5 742 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 MCCC2Q9HCC0 563 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CUEDC1Q9NWM3 386 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 USP20Q9Y2K6 914 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 PDLIM1O00151 329 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GRIA2P42262 883 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 AIMP2Q13155 320 aaKnown RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GPAT4Q86UL3 456 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SATL1Q86VE3 508 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 OR6K6Q8NGW6 343 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 OR52J3Q8NH60 311 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HSPA12BQ96MM6 686 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 MAPKAP1Q9BPZ7 522 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TNFRSF10DQ9UBN6 386 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 KCNN3Q9UGI6 736 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 FARSAQ9Y285 508 aaKnown RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 DPPA5A6NC42 116 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TBX1O43435 398 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 NRIP1P48552 1158 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CTBP2P56545 445 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 NFKB2Q00653 900 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HAGHLQ6PII5 290 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 OSTF1Q92882 214 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 FAM84AQ96KN4 292 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 MIR1-1HGQ9H1L0 117 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 BRD7Q9NPI1 651 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HTR2AP28223 471 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SLC18A1P54219 525 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CASP9P55211 416 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 PPTC7Q8NI37 304 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SLC7A6OSQ96CW6 309 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 INPP4AQ96PE3 977 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SLC30A2Q9BRI3 323 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TAS2R14Q9NYV8 317 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SLC15A5A6NIM6 579 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GLUD1P00367 558 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CTPS1P17812 591 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TSPAN8P19075 237 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HCAR3P49019 387 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF45Q02386 682 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GRK1Q15835 563 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ARL13AQ5H913 290 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 PDSS1Q5T2R2 415 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 IQCKQ8N0W5 287 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 LNX1Q8TBB1 728 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GTPBP3Q969Y2 492 aaKnown RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 MRPL45Q9BRJ2 306 aaKnown RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TCRBV5S4A2TA0A5A2 114 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 RHPN2P1A8MT19 583 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF670-ZNF695F2Z2N8 137 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GABRDO14764 452 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SOX10P56693 466 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HERVK_113P63132 956 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 DRICH1Q6PGQ1 229 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 VSIG10LQ86VR7 867 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 RDH12Q96NR8 316 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CYP2S1Q96SQ9 504 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 PFDN5Q99471 154 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ERVK-6Q9BXR3 956 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 AGRPO00253 132 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 SLC7A4O43246 635 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GNAO1P09471 354 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 PIM1P11309 404 aaPredicted RBP14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ATAT1Q5SQI0 421 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 AADACL4Q5VUY2 407 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 RHBDF2Q6PJF5 856 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CFAP206Q8IYR0 622 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 TCEAL4Q96EI5 215 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GIMAP5Q96F15 307 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 ZIM2Q9NZV7 527 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 CDC14AQ9UNH5 594 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 GJB6O95452 261 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 C1RP00736 705 aa14.17□□□□□ -0.14
PTPN13-203ENST00000427191 HK1P19367 917 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms