RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PI4KAP42356 2102 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 GSAPA4D1B5 854 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 ISM1B1AKI9 464 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 NR5A2O00482 541 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 MAP3K7O43318 606 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 CATP04040 527 aaKnown RBP9.47□□□□□ -0.89
SMPD4-203ENST00000412570 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-203ENST00000412570 EPB42P16452 691 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 CYP2A7P20853 494 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 SESN3P58005 492 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 ABRAXAS2Q15018 415 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 LEXMQ3ZCV2 418 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 NEK5Q6P3R8 708 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 TTC23LQ6PF05 361 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 ACAD11Q709F0 780 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 SNX32Q86XE0 403 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 TRIM48Q8IWZ4 208 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 DDHD1Q8NEL9 900 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 VPS33AQ96AX1 596 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 BMFQ96LC9 184 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 SORBS1Q9BX66 1292 aaKnown RBP9.47□□□□□ -0.89
SMPD4-203ENST00000412570 HDAC8Q9BY41 377 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 ZCCHC2Q9C0B9 1178 aaKnown RBP9.47□□□□□ -0.89
SMPD4-203ENST00000412570 ZNF225Q9UK10 706 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 DUSP12Q9UNI6 340 aa9.47□□□□□ -0.89
SMPD4-203ENST00000412570 TRBV5-4A0A0C4DH59 114 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 H7BY64 318 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 HDAC3O15379 428 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SNNO75324 88 aaPredicted RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 CFIP05156 583 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 COL6A2P12110 1019 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SCTRP47872 440 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PKNOX1P55347 436 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 DEFB133Q30KQ1 61 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 FRMD7Q6ZUT3 714 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 GATAD2AQ86YP4 633 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 KDM1BQ8NB78 822 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SELENOMQ8WWX9 145 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PEX13Q92968 403 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 GRAMD1AQ96CP6 724 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PRAP1Q96NZ9 151 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 TSSK3Q96PN8 268 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 TMEM79Q9BSE2 394 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PARVBQ9HBI1 364 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 IRAK4Q9NWZ3 460 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 TBC1D29Q9UFV1 150 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 KLF15Q9UIH9 416 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 RTCAO00442 366 aaKnown RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SEC22BO75396 215 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 TGFB1P01137 390 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 HTR1BP28222 390 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 RGS19P49795 217 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 ITIH4Q14624 930 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 CLCA4Q14CN2 919 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 ANKRD46Q86W74 232 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 ADHFE1Q8IWW8 467 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 INSM2Q96T92 566 aaPredicted RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 GABRG3Q99928 467 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 THTPAQ9BU02 230 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 ELOVL6Q9H5J4 265 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 AKTIPQ9H8T0 292 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 EML4Q9HC35 981 aaKnown RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PCTPQ9UKL6 214 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 ZNF490Q9ULM2 529 aaPredicted RBP9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PPIL1Q9Y3C6 166 aa9.46□□□□□ -0.89
SMPD4-203ENST00000412570 PVRP15151 417 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 MRPS21P82921 87 aaKnown RBP9.46□□□□□ -0.9
SMPD4-203ENST00000412570 CCDC15Q0P6D6 951 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 SLC22A9Q8IVM8 553 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 RHBDF1Q96CC6 855 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 RDH14Q9HBH5 336 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
SMPD4-203ENST00000412570 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.9
SMPD4-203ENST00000412570 PLRG1O43660 514 aaKnown RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 CEACAM5P06731 702 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 ALDH4A1P30038 563 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 NUDT2P50583 147 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 CSTF1Q05048 431 aaKnown RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 PTGR1Q14914 329 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 AMZ1Q400G9 498 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 TP53I13Q8NBR0 393 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 PIGKQ92643 395 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 MCUR1Q96AQ8 359 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 C19orf60Q96EN9 201 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 C7orf26Q96N11 449 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 MRPL1Q9BYD6 325 aaKnown RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 TUBB1Q9H4B7 451 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 PRSS38A1L453 326 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 E2F3O00716 465 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 CXCL12P48061 93 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 TBPL1P62380 186 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 LCP2Q13094 533 aa9.45□□□□□ -0.9
SMPD4-203ENST00000412570 CAPRIN1Q14444 709 aaKnown RBP9.45□□□□□ -0.9
SMPD4-203ENST00000412570 C6orf10Q5SRN2 563 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms