RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MEOX2P50222 304 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF41P51814 821 aaPredicted RBP6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 SELENOVP59797 346 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 DUSP7Q16829 419 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 TRAT1Q6PIZ9 186 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 LHFPL3Q86UP9 236 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 ZFAND4Q86XD8 727 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF679Q8IYX0 411 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 FNDC5Q8NAU1 212 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 FIBINQ8TAL6 211 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 LRRC20Q8TCA0 184 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 DTX3LQ8TDB6 740 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 NT5C3BQ969T7 300 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 TSPAN17Q96FV3 270 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 TEPSINQ96N21 525 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF184Q99676 751 aaPredicted RBP6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 BDH2Q9BUT1 245 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 APOBEC3GQ9HC16 384 aaKnown RBP6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 RNF146Q9NTX7 359 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 THEGQ9P2T0 379 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 MID2Q9UJV3 735 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 KCND3Q9UK17 655 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 POLIQ9UNA4 740 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 KPNA7A9QM74 516 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 E7ESA3 106 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PRR23D1E9PI22 279 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 APOC4-APOC2K7ER74 178 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 NOP56O00567 594 aaKnown RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 VEGFDO43915 354 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 RHOBTB1O94844 696 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 TGM6O95932 706 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 IL1BP01584 269 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 IGHEP01854 428 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 TNNC2P02585 160 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 APOC2P02655 101 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PRR23D2P0DMB1 279 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FGFR1P11362 822 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 HNF1AP20823 631 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 BGNP21810 368 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 WARSP23381 471 aaKnown RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 CTGFP29279 349 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 RPL22P35268 128 aaKnown RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 BUD31P41223 144 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC1A3P43003 542 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 GPR176Q14439 515 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SNX17Q15036 470 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PON3Q15166 354 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 DGKDQ16760 1214 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 DUOXA2Q1HG44 320 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF484Q5JVG2 852 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 KIAA1161Q6NSJ0 714 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC26A11Q86WA9 606 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 NANPQ8TBE9 248 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF296Q8WUU4 475 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FAF2Q96CS3 445 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF486Q96H40 463 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 RILPQ96NA2 401 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 COPS4Q9BT78 406 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 NMUR1Q9HB89 426 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 GDE1Q9NZC3 331 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC17A7Q9P2U7 560 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 STYXL1Q9Y6J8 313 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNFX1Q9P2E3 1918 aaKnown RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF236Q9UL36 1845 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 GNG14A0A1W2PPG7 69 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 MARCH11A6NNE9 402 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 INPPL1O15357 1258 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PEX10O60683 326 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 BANF1O75531 89 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 RFPL3O75679 317 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 KRT36O76013 467 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 CSF2P04141 144 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PRPS1L1P21108 318 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 TACR3P29371 465 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 PIK3CBP42338 1070 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ERVFC1P60507 584 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FKBP1BP68106 108 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 IRX4P78413 519 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM189BP81408 668 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 MC1RQ01726 317 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZP2Q05996 745 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 BAATQ14032 418 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 WDR72Q3MJ13 1102 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 MSANTD2Q6P1R3 559 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FBXO46Q6PJ61 603 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 WDR48Q8TAF3 677 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 LKAAEAR1Q8TD35 194 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 DCAKDQ8WVC6 231 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 MS4A4AQ96JQ5 239 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SERAC1Q96JX3 654 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM84AQ96KN4 292 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ACO2Q99798 780 aaKnown RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ALX4Q9H161 411 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ASB8Q9H765 288 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 GBA2Q9HCG7 927 aaPredicted RBP6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 ASCL3Q9NQ33 180 aa6.46□□□□□ -1.38
TM9SF4-202ENST00000398022 SIGLEC16A6NMB1 481 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RHPN2P1A8MT19 583 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms