RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CASS4Q9NQ75 786 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 EIF2B3Q9NR50 452 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 RAB6BQ9NRW1 208 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 PIH1D1Q9NWS0 290 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TDRKHQ9Y2W6 561 aaKnown RBP12.55□□□□□ -0.4
RPAIN-202ENST00000381208 TCAF1Q9Y4C2 921 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 PRSS21Q9Y6M0 314 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
RPAIN-202ENST00000381208 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 MAST4O15021 2626 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 OR51F1A6NGY5 319 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PRMT5O14744 637 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-202ENST00000381208 KPNA5O15131 536 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 DPM1O60762 260 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 CEACAM4O75871 244 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 APRTP07741 180 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PVRP15151 417 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 NR1D1P20393 614 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PTGIRP43119 386 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 SSPNQ14714 243 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 BRD3Q15059 726 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 IGFBP7Q16270 282 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 CCNG2Q16589 344 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PCID2Q5JVF3 399 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PRAMEF17Q5VTA0 474 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 TTC23LQ6PF05 361 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 LRRC6Q86X45 466 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 DCUN1D3Q8IWE4 304 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 SLC22A15Q8IZD6 547 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-202ENST00000381208 GLIS1Q8NBF1 620 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 GSDMBQ8TAX9 411 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 FER1L6-AS2Q96M78 137 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 AP1M1Q9BXS5 423 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 TXLNGQ9NUQ3 528 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 INTS7Q9NVH2 962 aaKnown RBP12.54□□□□□ -0.4
RPAIN-202ENST00000381208 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-202ENST00000381208 GUCA1BQ9UMX6 200 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 PLCL2Q9UPR0 1127 aa12.54□□□□□ -0.4
RPAIN-202ENST00000381208 TTLL8A6PVC2 850 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 PFDN6O15212 129 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 ZSCAN9O15535 394 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-202ENST00000381208 VPS4BO75351 444 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 DNAJB5O75953 348 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 S1PR4O95977 384 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 CAPN1P07384 714 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 DCDP81605 110 aaKnown RBP12.53□□□□□ -0.4
RPAIN-202ENST00000381208 CDK16Q00536 496 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 HSPA14Q0VDF9 509 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 ARMC3Q5W041 872 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-202ENST00000381208 RAB42Q8N4Z0 105 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 FAM26EQ8N5C1 309 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 DLG3Q92796 817 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 NACC2Q96BF6 587 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 NDC1Q9BTX1 674 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 HOMER3Q9NSC5 361 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 CATSPERZQ9NTU4 200 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 C5AR2Q9P296 337 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 ANKMY1Q9P2S6 941 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 NDOR1Q9UHB4 597 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 GNPTGQ9UJJ9 305 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 VPS4AQ9UN37 437 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
RPAIN-202ENST00000381208 FLNCQ14315 2725 aa12.53□□□□□ -0.4
RPAIN-202ENST00000381208 CLEC18AA5D8T8 446 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ISM1B1AKI9 464 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 K7EM74 188 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 PEX12O00623 359 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 OR1I1O60431 355 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 GPC4O75487 556 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 SLCO2B1O94956 709 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 PIM1P11309 404 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-202ENST00000381208 PKLRP30613 574 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 CCR7P32248 378 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 NPY2RP49146 381 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ARSFP54793 590 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 KYNUQ16719 465 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 PTCHD3Q3KNS1 767 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
RPAIN-202ENST00000381208 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-202ENST00000381208 CPZQ66K79 652 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 CLEC18BQ6UXF7 455 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF662Q6ZS27 426 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF534Q76KX8 674 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 DNAJC22Q8N4W6 341 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ZBTB2Q8N680 514 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 CLEC18CQ8NCF0 446 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 GALNT11Q8NCW6 608 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms