RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 BMP4P12644 408 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 HSPA13P48723 471 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SLC9A3P48764 834 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 STX1BP61266 288 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 GALNT3Q14435 633 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF846Q147U1 533 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TSTD2Q5T7W7 516 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 CES3Q6UWW8 571 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 FRA10AC1Q70Z53 315 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SLC26A11Q86WA9 606 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 CNTN4Q8IWV2 1026 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF781Q8N8C0 355 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 FAM83FQ8NEG4 500 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 MAGEE2Q8TD90 523 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 PIH1D2Q8WWB5 315 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 NXPE3Q969Y0 559 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF669Q96BR6 464 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 DACH2Q96NX9 599 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF347Q96SE7 839 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 MCMBPQ9BTE3 642 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ADGRE3Q9BY15 652 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TNKS2Q9H2K2 1166 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ELOVL2Q9NXB9 296 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 GTSE1Q9NYZ3 720 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TEKT2Q9UIF3 430 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 EYSQ5T1H1 3165 aa9.9□□□□□ -0.83
SYNE1-203ENST00000354674 ANKRD66B4E2M5 251 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 MBTPS2O43462 519 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 MTRF1O75570 445 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ATP5BP06576 529 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 GDI1P31150 447 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 TXNL4AP83876 142 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 N4BP2L1Q5TBK1 243 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 KIAA0930Q6ICG6 404 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 DCP2Q8IU60 420 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 DDIASQ8IXT1 998 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 OR13J1Q8NGT2 312 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 OR2A12Q8NGT7 310 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 DHRS9Q9BPW9 319 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 REXO4Q9GZR2 422 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 REV1Q9UBZ9 1251 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PPIL1Q9Y3C6 166 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 A0A0X1KG70 313 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 NUPL2O15504 423 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ZW10O43264 779 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 POP4O95707 220 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 SAT1P21673 171 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 DCKP27707 260 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PIK3R1P27986 724 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 KRT6CP48668 564 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 VBP1P61758 197 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PRKCQQ04759 706 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 GRM3Q14832 879 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ITPRIPL2Q3MIP1 535 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 HMBOX1Q6NT76 420 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ESRP1Q6NXG1 681 aaKnown RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PAGE2Q7Z2X7 111 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ARMC8Q8IUR7 673 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 CYB5D2Q8WUJ1 264 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 SORCS1Q8WY21 1168 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 MYLIPQ8WY64 445 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF597Q96LX8 424 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 C19orf43Q9BQ61 176 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 UBE2ZQ9H832 354 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 KCNN3Q9UGI6 736 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PADI4Q9UM07 663 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 MYO9BQ13459 2157 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PRSS51A0A1B0GVH4 220 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 C9JVG2 144 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 H3BQ06 376 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 CASP3P42574 277 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 GRIA4P48058 902 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 CHRNEQ04844 493 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 BCL2L1Q07817 233 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ACAP2Q15057 778 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 DPY19L3Q6ZPD9 716 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ADCK1Q86TW2 530 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 CAMK1DQ8IU85 385 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 MDGA1Q8NFP4 955 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 NDNFQ8TB73 568 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 CANT1Q8WVQ1 401 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 TP53INP1Q96A56 240 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF641Q96N77 438 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ADI1Q9BV57 179 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 PIF1Q9H611 641 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 ACTR3BQ9P1U1 418 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 SLC2A6Q9UGQ3 507 aa9.89□□□□□ -0.83
SYNE1-203ENST00000354674 SNX2O60749 519 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 BCAS1O75363 584 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PIGNO95427 931 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms