RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CD22P20273 847 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 HENMT1Q5T8I9 393 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 BRAT1Q6PJG6 821 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 SP7Q8TDD2 431 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 MTERF1Q99551 399 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 MAGED1Q9Y5V3 778 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 RGS14O43566 566 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CISD3P0C7P0 127 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 NNMTP40261 264 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 HALP42357 657 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 GNPDA1P46926 289 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 PLOD1Q02809 727 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 VN1R2Q8NFZ6 395 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 OR10A6Q8NH74 314 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CDC26Q8NHZ8 85 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CGREF1Q99674 301 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CENPKQ9BS16 269 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 NTMT1Q9BV86 223 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 SLC12A9Q9BXP2 914 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CARS2Q9HA77 564 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 SLC25A37Q9NYZ2 338 aa22.53■■□□□ 1.2
CLPTM1-201ENST00000337392 CWF19L1Q69YN2 538 aaKnown RBP22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 LCN8Q6JVE9 175 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 SLC30A9Q6PML9 568 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 ERMP1Q7Z2K6 904 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 MSRB3Q8IXL7 192 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 SMG7Q92540 1137 aaKnown RBP22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 AP2M1Q96CW1 435 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 GBP5Q96PP8 586 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 LMCD1Q9NZU5 365 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 F5P12259 2224 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 TCRBV5S2A0A599 114 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 ARHGEF33A8MVX0 844 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 SPINT1O43278 529 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 DENRO43583 198 aaKnown RBP22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 XYLBO75191 536 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 HIST1H2AGP0C0S8 130 aaPredicted RBP22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 EBLN1P0CF75 366 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 HIST1H2ADP20671 130 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 LIPIQ6XZB0 460 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 HID1Q8IV36 788 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 MARVELD2Q8N4S9 558 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 SLC13A3Q8WWT9 602 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 HIST1H2AHQ96KK5 128 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 APOLD1Q96LR9 279 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 HIST1H2AJQ99878 128 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 H2AFJQ9BTM1 129 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 DPY30Q9C005 99 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 RDH14Q9HBH5 336 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 TBC1D14Q9P2M4 693 aa22.52■■□□□ 1.2
CLPTM1-201ENST00000337392 LRRK1Q38SD2 2015 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 PSMA4P25789 261 aaKnown RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 NUMA1Q14980 2115 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 ZNF805Q5CZA5 627 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 ANKRD26P1Q6NSI1 321 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 PRMT9Q6P2P2 845 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 GTF2H4Q92759 462 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 BIRC7Q96CA5 298 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 INPP5KQ9BT40 448 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 TMEM106CQ9BVX2 250 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 ELOVL6Q9H5J4 265 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 GULP1Q9UBP9 304 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 PCYT1BQ9Y5K3 369 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 ALPK3Q96L96 1907 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 IFRD1O00458 451 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 CAPNS1P04632 268 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 PFN3P60673 137 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 C9orf50Q5SZB4 431 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 RAVER1Q8IY67 606 aaKnown RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 FIG4Q92562 907 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 PPP3R2Q96LZ3 170 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 RNF145Q96MT1 663 aa22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 THUMPD3Q9BV44 507 aaKnown RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-201ENST00000337392 E7EQ34 232 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 PGRP06401 933 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 NFKBIAP25963 317 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 CHIT1Q13231 466 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 FAM78AQ5JUQ0 283 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 GLYATQ6IB77 296 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 UBTD2Q8WUN7 234 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 USP7Q93009 1102 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 PFDN4Q9NQP4 134 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 RAB26Q9ULW5 256 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 LZTS1Q9Y250 596 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 EIF3LQ9Y262 564 aaKnown RBP22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 DLGAP1O14490 977 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 NUAK1O60285 661 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 CDKN2CP42773 168 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 GRM2Q14416 872 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 GBX1Q14549 363 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 MAPKAPK3Q16644 382 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 TMEM220Q6QAJ8 160 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 C2orf73Q8N5S3 287 aaPredicted RBP22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 EZH1Q92800 747 aaPredicted RBP22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 PDP2Q9P2J9 529 aa22.5■■□□□ 1.19
CLPTM1-201ENST00000337392 JAK1P23458 1154 aa22.49■■□□□ 1.19
CLPTM1-201ENST00000337392 DDX6P26196 483 aaKnown RBP eCLIP22.49■■□□□ 1.19
CLPTM1-201ENST00000337392 MMP12P39900 470 aa22.49■■□□□ 1.19
CLPTM1-201ENST00000337392 IST1P53990 364 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms