RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 UGT1A9O60656 530 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A6P19224 532 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A1P22309 533 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A4P22310 534 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 MANFP55145 182 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PIK3R6Q5UE93 754 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TMCO2Q7Z6W1 182 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TNS4Q8IZW8 715 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 KLHL36Q8N4N3 616 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 NAT16Q8N8M0 369 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 OR8D1Q8WZ84 308 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ISOC1Q96CN7 298 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 L3HYPDHQ96EM0 354 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TCEAL7Q9BRU2 100 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 NT5DC2Q9H857 520 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GPN2Q9H9Y4 310 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A7Q9HAW7 530 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A10Q9HAW8 530 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A8Q9HAW9 530 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TMEM27Q9HBJ8 222 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ABT1Q9ULW3 272 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 COG5Q9UP83 839 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ERCC1P07992 297 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 RFC2P35250 354 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 RINLQ6ZS11 566 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF781Q8N8C0 355 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DEDD2Q8WXF8 326 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF641Q96N77 438 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CGREF1Q99674 301 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 GTPBP2Q9BX10 602 aaKnown RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 GPRC5BQ9NZH0 403 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 ZNHIT2Q9UHR6 403 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PLEKHA6Q9Y2H5 1048 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 TELO2Q9Y4R8 837 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PLXNB2O15031 1838 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 A0A0G2JLW4 131 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 GLYATL1P3A0A0U1RQE8 302 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PHYHO14832 338 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 AP1G1O43747 822 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PEX10O60683 326 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 OR6A2O95222 327 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SLC35G4P0C7Q5 338 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 LILRA4P59901 499 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 GNA12Q03113 381 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 NOMO2Q5JPE7 1267 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 FAM182AQ5T1J6 154 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 ZDHHC21Q8IVQ6 265 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 MFSD2AQ8NA29 543 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 OR4C6Q8NH72 309 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SUN5Q8TC36 379 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 BTN2A2Q8WVV5 523 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 IFT27Q9BW83 186 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DTLQ9NZJ0 730 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CDH7Q9ULB5 785 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 MGAT4AQ9UM21 535 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SNX8Q9Y5X2 465 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 GNB5O14775 395 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DUSP11O75319 330 aaKnown RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 FMO4P31512 558 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CBX5P45973 191 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 TEKQ02763 1124 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 MANEALQ5VSG8 457 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 LGI2Q8N0V4 545 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 EID2Q8N6I1 236 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PGAP3Q96FM1 320 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 BTF3L4Q96K17 158 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CD93Q9NPY3 652 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 MSL3P1P0C860 447 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SLC32A1Q9H598 525 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 RASSF1Q9NS23 344 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 PTGFRNQ9P2B2 879 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 YAP1P46937 504 aaKnown RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 FBXO16Q8IX29 292 aaPredicted RBP8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SLC7A13Q8TCU3 470 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 LPGAT1Q92604 370 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 CIB1Q99828 191 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 TTPALQ9BTX7 342 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 SLA2Q9H6Q3 261 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 ELP3Q9H9T3 547 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 DHRS7Q9Y394 339 aa8.65□□□□□ -1.02
COL6A5-202ENST00000312481 KANK2Q63ZY3 851 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 HPS6Q86YV9 775 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 CILP2Q8IUL8 1156 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 KSR1Q8IVT5 923 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM199Q8N511 208 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 GPR150Q8NGU9 434 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 MAN1C1Q9NR34 630 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 SLC25A12O75746 678 aa8.65□□□□□ -1.03
COL6A5-202ENST00000312481 DDX39BQ13838 428 aaKnown RBP8.65□□□□□ -1.03
COL6A5-202ENST00000312481 FAM131AQ6UXB0 335 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms