RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 LHX1P48742 406 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 HCAR3P49019 387 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 NPY2RP49146 381 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 SERPINB8P50452 374 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CSRP3P50461 194 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RPS6KA3P51812 740 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CHN2P52757 468 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 LIMK2P53671 638 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BCAT1P54687 386 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 POLE2P56282 527 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 HDAC4P56524 1084 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PDE1BQ01064 536 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF33AQ06730 810 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BST2Q10589 180 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 LMAN2Q12907 356 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CCNIQ14094 377 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PDE1CQ14123 709 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PAFAH1B3Q15102 231 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 DUOXA1Q1HG43 343 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 C15orf59Q2T9L4 293 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA7BQ2TAP0 167 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CNPY1Q3B7I2 92 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 MDH1BQ5I0G3 518 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 FOXB2Q5VYV0 432 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 LYSMD4Q5XG99 296 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PDPK2PQ6A1A2 396 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PMF1Q6P1K2 205 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 SCYL2Q6P3W7 929 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BNIPLQ7Z465 357 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CLEC14AQ86T13 490 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 C11orf74Q86VG3 221 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 KLHDC8BQ8IXV7 354 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 AHI1Q8N157 1196 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CRYBG2Q8N1P7 616 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF513Q8N8E2 541 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ANKRD52Q8NB46 1076 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ICA1LQ8NDH6 482 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ZMIZ2Q8NF64 920 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RP9Q8TA86 221 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 UBA3Q8TBC4 463 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PDCD6IPQ8WUM4 868 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ADAMTS14Q8WXS8 1223 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 GFM2Q969S9 779 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 VOPP1Q96AW1 172 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF778Q96MU6 729 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CSPG4P5Q96PW8 444 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TUBGCP5Q96RT8 1024 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 SORT1Q99523 831 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TTC1Q99614 292 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RBBP8Q99708 897 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 EBF4Q9BQW3 602 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 GTPBP2Q9BX10 602 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 C20orf27Q9GZN8 174 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CDH19Q9H159 772 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CCSER2Q9H7U1 834 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 IL21RQ9HBE5 538 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PTTG2Q9NZH5 202 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 IL37Q9NZH6 218 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TRPM5Q9NZQ8 1165 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BFARQ9NZS9 450 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TXNDC16Q9P2K2 825 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CIDEBQ9UHD4 219 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CDH9Q9ULB4 789 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TMCO1Q9UM00 188 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 POMPQ9Y244 141 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RAP2CQ9Y3L5 183 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 COL27A1Q8IZC6 1860 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 AHCTF1Q8WYP5 2266 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DOPEY2Q9Y3R5 2298 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 E2F8A0AVK6 867 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DYTNA2CJ06 578 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TPP1O14773 563 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 HDAC3O15379 428 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 HOXC11O43248 304 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ITM2AO43736 263 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UGT1A9O60656 530 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 RNASEH1O60930 286 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 DAB1O75553 588 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 BEST1O76090 585 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 USP1O94782 785 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TNFAIP8O95379 198 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 AP2A1O95782 977 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 TBX18O95935 607 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PRKCGP05129 697 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 CISD3P0C7P0 127 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 UBTFL6P0CB48 400 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 KITP10721 976 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MBL2P11226 248 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 HOXB2P14652 356 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
CKS1B-201ENST00000308987 ITGAXP20702 1163 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 NTSR1P30989 418 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 HOXD12P35452 270 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 MATKP42679 507 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 PSMD8P48556 350 aa4.83□□□□□ -1.64
CKS1B-201ENST00000308987 SLC25A3Q00325 362 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms