RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GPNMBQ14956 572 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MAD2L1BPQ15013 274 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 GGTA1PQ4G0N0 100 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 TIGD2Q4W5G0 525 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MPPE1Q53F39 396 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CLLU1OSQ5K130 101 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 OVOS1Q6IE37 1185 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 IFNL1Q8IU54 200 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PIANPQ8IYJ0 282 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ELMOD1Q8N336 334 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CCNYL1Q8N7R7 359 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PTGR2Q8N8N7 351 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 DNAAF3Q8N9W5 541 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 SCAMP5Q8TAC9 235 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 DNAJB14Q8TBM8 379 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 IGSF8Q969P0 613 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 FAM49AQ9H0Q0 323 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 AP5M1Q9H0R1 490 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 RAD21L1Q9H4I0 556 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PRDM8Q9NQV8 689 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GPATCH2Q9NW75 528 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 NPAP1Q9NZP6 1156 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 DNAJB9Q9UBS3 223 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PAIP2BQ9ULR5 123 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 TESMINQ9Y4I5 508 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ARL5AQ9Y689 179 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 XIRP2A4UGR9 3374 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MKI67P46013 3256 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 A0A1W2PQ67 120 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 A0A1W2PQH9 124 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 AGAP5A6NIR3 686 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 FAM220BPB1ANY3 271 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 F8W810 466 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 XPNPEP2O43895 674 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 WDR47O94967 919 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 SNX4O95219 450 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 TP53P04637 393 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 UROSP10746 265 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CDKN2CP42773 168 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GALK2Q01415 458 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 DSC2Q02487 901 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PRKCDQ05655 676 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GPR17Q13304 367 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ITGADQ13349 1161 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 GLYATQ6IB77 296 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CRTC3Q6UUV7 619 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 CBARPQ8N350 705 aaPredicted RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 DNASE1L2Q92874 299 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 FAM149B1Q96BN6 582 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 PLD4Q96BZ4 506 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ALG14Q96F25 216 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 TRMT61AQ96FX7 289 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 YME1L1Q96TA2 773 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 MED10Q9BTT4 135 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 RNF167Q9H6Y7 350 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 ZNF226Q9NYT6 803 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 EXO1Q9UQ84 846 aaKnown RBP5.33□□□□□ -1.56
VPS50-202ENST00000305866 BACE2Q9Y5Z0 518 aa5.33□□□□□ -1.56
VPS50-202ENST00000305866 IGLV3-16A0A075B6K0 115 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ILVBLA1L0T0 632 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 C1orf226A1L170 272 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 A6NL46 340 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SMAD6O43541 496 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 NOBOXO60393 691 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SOAT2O75908 522 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 G6PDP11413 515 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 PPP3CCP48454 512 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 CDH4P55283 916 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 MTPNP58546 118 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 STX1BP61266 288 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 VBP1P61758 197 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 EEF1A2Q05639 463 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 C19orf57Q0VDD7 668 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ABRAXAS2Q15018 415 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 CCL14Q16627 93 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 GTDC1Q4AE62 458 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SMUG1Q53HV7 270 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZNF770Q6IQ21 691 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 SLC8B1Q6J4K2 584 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 FBXL22Q6P050 247 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 PAQR3Q6TCH7 311 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 RNF19BQ6ZMZ0 732 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 MMAAQ8IVH4 418 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 UBQLNLQ8IYU4 475 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 SVOPLQ8N434 492 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 CHTF18Q8WVB6 975 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ERLEC1Q96DZ1 483 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ZNF486Q96H40 463 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 METTL2AQ96IZ6 378 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 TRIM15Q9C019 465 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 WDR12Q9GZL7 423 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 SYTL2Q9HCH5 934 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 EXD2Q9NVH0 621 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 MARCH5Q9NX47 278 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 NFKBIL1Q9UBC1 381 aaPredicted RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 MAGEL2Q9UJ55 1249 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 ACTL7AQ9Y615 435 aa5.32□□□□□ -1.56
VPS50-202ENST00000305866 CFAP20Q9Y6A4 193 aaKnown RBP5.32□□□□□ -1.56
VPS50-202ENST00000305866 INPP4BO15327 924 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms