RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KCNK13Q9HB14 408 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 GPN1Q9HCN4 374 aaPredicted RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 C20orf141Q9NUB4 165 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 AGPAT5Q9NUQ2 364 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 DLGAP2Q9P1A6 1054 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 PEMTQ9UBM1 199 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HEY2Q9UBP5 337 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HESX1Q9UBX0 185 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 HAO1Q9UJM8 370 aa4.5□□□□□ -1.69
CD44-202ENST00000278385 WBP11Q9Y2W2 641 aaKnown RBP4.5□□□□□ -1.69
CD44-202ENST00000278385 COL2A1P02458 1487 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 SPEF2Q9C093 1822 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 A0A1W2PR77 199 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC15A5A6NIM6 579 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NPIPB13A6NJU9 1138 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NPIPB4C9JG80 1138 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC16A3O15427 465 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 PLRG1O43660 514 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 NDUFS3O75489 264 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 RHOBTB1O94844 696 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 MFN2O95140 757 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NDUFA10O95299 355 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 GH1P01241 217 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OR52Z1P0C646 297 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PKMP14618 531 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 MMP9P14780 707 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 HPGDP15428 266 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CAPN2P17655 700 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ADRA1DP25100 572 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CDC25CP30307 473 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NTSR1P30989 418 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 FMO4P31512 558 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 MTNR1AP48039 350 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SUOXP51687 545 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OAZ1P54368 228 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 GALCP54803 685 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 F2RL1P55085 397 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 SOX10P56693 466 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 BACE1P56817 501 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 MAP3K7CLP57077 242 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 DYNLL1P63167 89 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 DGCR2P98153 550 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 RBPJQ06330 500 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 MZT1Q08AG7 82 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 DHX34Q14147 1143 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 SNAPC1Q16533 368 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ZIK1Q3SY52 487 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 C20orf194Q5TEA3 1177 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ATG9BQ674R7 924 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PDPK2PQ6A1A2 396 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 TTC19Q6DKK2 380 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 WBP2NLQ6ICG8 309 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ZSCAN25Q6NSZ9 544 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 BRAT1Q6PJG6 821 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 C6orf89Q6UWU4 347 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ARSKQ6UWY0 536 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 KIAA1324Q6UXG2 1013 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 WDR88Q6ZMY6 472 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 C11orf57Q6ZUT1 292 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 TAOK1Q7L7X3 1001 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 LRRC70Q7Z2Q7 622 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CUZD1Q86UP6 607 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ZNF280BQ86YH2 543 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CD302Q8IX05 232 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 LCORLQ8N3X6 602 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ARFGAP2Q8N6H7 521 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.49□□□□□ -1.69
CD44-202ENST00000278385 GBP7Q8N8V2 638 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 L3MBTL4Q8NA19 623 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 C11orf65Q8NCR3 313 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OR10S1Q8NGN2 331 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OR9A1PQ8NGU1 263 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OR2T3Q8NH03 318 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 C9orf43Q8TAL5 461 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC35B2Q8TB61 432 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PROKR1Q8TCW9 393 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NEU4Q8WWR8 484 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 ROBO4Q8WZ75 1007 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 OVCA2Q8WZ82 227 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 LRRC45Q96CN5 670 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SNRNP40Q96DI7 357 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 RNF31Q96EP0 1072 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PGM2Q96G03 612 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 VCPIP1Q96JH7 1222 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 C7orf34Q96L11 122 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 HIST1H2AAQ96QV6 131 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 TRIB1Q96RU8 372 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 NPAS1Q99742 590 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CRNKL1Q9BZJ0 848 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 S1PR5Q9H228 398 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 VCX2Q9H322 139 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 BOLA2Q9H3K6 86 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 DCTPP1Q9H773 170 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 EXO5Q9H790 373 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ANKZF1Q9H8Y5 726 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms