RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 GDF5P43026 501 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 GHRHRQ02643 423 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 SNAPC1Q16533 368 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 FRMD7Q6ZUT3 714 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 SVOPLQ8N434 492 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 SCAIQ8N9R8 606 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 ZNF563Q8TA94 476 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 LRRC58Q96CX6 371 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 MRPS30Q9NP92 439 aaKnown RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 PFKMP08237 780 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 MTHFD1P11586 935 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 HSD17B2P37059 387 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 TRIM32Q13049 653 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 TMEM130Q8N3G9 435 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 PSMA8Q8TAA3 256 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 GIPC3Q8TF64 312 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 IMP4Q96G21 291 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 CARS2Q9HA77 564 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 HEBP2Q9Y5Z4 205 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 ALS2Q96Q42 1657 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 EDDM13A0A1B0GTR0 161 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 LRRC14BA6NHZ5 514 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 AQP12BA6NM10 295 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 RB1P06400 928 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 CBSLP0DN79 551 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 AOC1P19801 751 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 SLC7A1P30825 629 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 CBSP35520 551 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 EEFSECP57772 596 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 CREB5Q02930 508 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 TAB1Q15750 504 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 MINDY4Q4G0A6 757 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 IFI44LQ53G44 452 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 RAB6CQ53S08 254 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 AQP12AQ8IXF9 295 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 ZMIZ2Q8NF64 920 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 IGSF8Q969P0 613 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 RBM18Q96H35 190 aaKnown RBP13.71□□□□□ -0.22
CDH3-201ENST00000264012 PSKH2Q96QS6 385 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 RAB6CQ9H0N0 254 aa13.71□□□□□ -0.22
CDH3-201ENST00000264012 TSC22D2O75157 780 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 TBX10O75333 385 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 TGFB1P01137 390 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 NEK5Q6P3R8 708 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 RPS27LQ71UM5 84 aaKnown RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 MOSPD2Q8NHP6 518 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 ASB9Q96DX5 294 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 FCRL3Q96P31 734 aaPredicted RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 SLC39A3Q9BRY0 314 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 EBF3Q9H4W6 596 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 ELAC1Q9H777 363 aaKnown RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 SIRPGQ9P1W8 387 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 B4GALT6Q9UBX8 382 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 MYH1P12882 1939 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 A0A0G2JN53 185 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 STX16-NPEPL1H3BU86 382 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 POP7O75817 140 aaKnown RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 CCR10P46092 362 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 SCAPQ12770 1279 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 GALNT15Q8N3T1 639 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 KCNJ9Q92806 393 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 TRMT61BQ9BVS5 477 aaKnown RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 MTRRQ9UBK8 725 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 A0A1W2PRB8 838 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 DGKQP52824 942 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 MPP2Q14168 576 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 PRAMEF14Q5SWL7 426 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 PRAMEF13Q5VWM6 474 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
CDH3-201ENST00000264012 KLHL17Q6TDP4 642 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 RTL4Q6ZR62 310 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 S100A13Q99584 98 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 CGREF1Q99674 301 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
CDH3-201ENST00000264012 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDH3-201ENST00000264012 LOC730098B7Z3J9 87 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 TMCC2O75069 709 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CD247P20963 164 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
CDH3-201ENST00000264012 GKP32189 559 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 CCR8P51685 355 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 GPRC6AQ5T6X5 926 aa13.69□□□□□ -0.22
CDH3-201ENST00000264012 FAAH2Q6GMR7 532 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms