RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 SOS1Q07889 1333 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 GPR75-ASB3A0A0A6YYF3 556 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 LOC101059948A0A1B0GTJ6 334 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ANKUB1A6NFN9 424 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 SH2B2O14492 632 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZNF821O75541 412 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 PRKRAO75569 313 aaKnown RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 CDC123O75794 336 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZNF26P17031 533 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 EFNA1P20827 205 aaPredicted RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 DNASE1P24855 282 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 SNRPD1P62314 119 aaKnown RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 PRKCZQ05513 592 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 STK4Q13043 487 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 TUBB2AQ13885 445 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 CYP4A22Q5TCH4 519 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZC2HC1BQ5TFG8 222 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 SPATA1Q5VX52 437 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZNF497Q6ZNH5 498 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ADIPOR2Q86V24 386 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 CEP57L1Q8IYX8 460 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ARHGAP24Q8N264 748 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 GUF1Q8N442 669 aaKnown RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 TMEM178AQ8NBL3 297 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 OR13J1Q8NGT2 312 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZNF622Q969S3 477 aaKnown RBP eCLIP2.97□□□□□ -1.93
VBP1-204ENST00000625964 OLFM1Q99784 485 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 TUBB2BQ9BVA1 445 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 MXD3Q9BW11 206 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 LAT2Q9GZY6 243 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 CCDC68Q9H2F9 335 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ARRDC1-AS1Q9H2J1 176 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 ZDHHC2Q9UIJ5 367 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 TUBE1Q9UJT0 475 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 MTUS1Q9ULD2 1270 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 WBP11Q9Y2W2 641 aaKnown RBP2.97□□□□□ -1.93
VBP1-204ENST00000625964 PYGO1Q9Y3Y4 419 aa2.97□□□□□ -1.93
VBP1-204ENST00000625964 IGHV4-4A0A075B6R2 117 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 A0A087X002 238 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 A0A1W2PN81 502 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 MEIOCA2RUB1 952 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 TPOP07202 933 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 OR2T7P0C7T2 308 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 FAM157CP0CG43 387 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 CA4P22748 312 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 SLC6A6P31641 620 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 CHRNA7P36544 502 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 CDH13P55290 713 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 SP3Q02447 781 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 HNRNPDQ14103 355 aaKnown RBP2.96□□□□□ -1.94
VBP1-204ENST00000625964 PWWP2BQ6NUJ5 590 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 BHLHB9Q6PI77 547 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 MINDY1Q8N5J2 469 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 OR2T11Q8NH01 316 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 FGFBP3Q8TAT2 258 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 SUSD6Q92537 303 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 GMPPAQ96IJ6 420 aaPredicted RBP2.96□□□□□ -1.94
VBP1-204ENST00000625964 MS4A10Q96PG2 267 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 PYGO2Q9BRQ0 406 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 BTBD10Q9BSF8 475 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 NUP85Q9BW27 656 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 UBA5Q9GZZ9 404 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 PDE7BQ9NP56 450 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.96□□□□□ -1.94
VBP1-204ENST00000625964 INTS9Q9NV88 658 aaKnown RBP2.96□□□□□ -1.94
VBP1-204ENST00000625964 ATAD3AQ9NVI7 634 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 CACNG4Q9UBN1 327 aa2.96□□□□□ -1.94
VBP1-204ENST00000625964 CHORDC1Q9UHD1 332 aaPredicted RBP2.96□□□□□ -1.94
VBP1-204ENST00000625964 PPIEQ9UNP9 301 aaKnown RBP2.96□□□□□ -1.94
VBP1-204ENST00000625964 DISP3Q9P2K9 1392 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 ZNF541Q9H0D2 1346 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 A0A087WW49 117 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 MEIS2O14770 477 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 IPO8O15397 1037 aaKnown RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 OR10H2O60403 315 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 BEST1O76090 585 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 RAF1P04049 648 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 SLC9A3P48764 834 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 CLK1P49759 484 aaKnown RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 B3GALT5-AS1P59052 145 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 IRX1P78414 480 aaPredicted RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 PRKG2Q13237 762 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 ELFN2Q5R3F8 820 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 ADAMTSL4-AS1Q5T5F5 129 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 DNAAF5Q86Y56 855 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 TMEM139Q8IV31 216 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 CDK20Q8IZL9 346 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 SCML4Q8N228 414 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 OR2T6Q8NHC8 308 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 EXD1Q8NHP7 514 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 MRGPRDQ8TDS7 321 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 CCDC107Q8WV48 283 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 IRGQQ8WZA9 623 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 ZNF653Q96CK0 615 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 MRPL1Q9BYD6 325 aaKnown RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 SDR39U1Q9NRG7 319 aaPredicted RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 DPP3Q9NY33 737 aa2.95□□□□□ -1.94
VBP1-204ENST00000625964 CPSF2Q9P2I0 782 aaKnown RBP2.95□□□□□ -1.94
VBP1-204ENST00000625964 B3GAT1Q9P2W7 334 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms