RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 RBM18Q96H35 190 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ATG10Q9H0Y0 220 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 COPS7AQ9UBW8 275 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 CFL2Q9Y281 166 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 IGFBP4P22692 258 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 CLCN4P51793 760 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 LILRA4P59901 499 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 CARTPTQ16568 116 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 PLEKHG6Q3KR16 790 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 IQCCQ4KMZ1 466 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 RALGPS1Q5JS13 557 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ATAD1Q8NBU5 361 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 C11orf16Q9NQ32 467 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 ABI3Q9P2A4 366 aa17.11■□□□□ 0.33
HMGXB3-206ENST00000613459 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 KMOO15229 486 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 RBMXL2O75526 392 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 AZGP1P25311 298 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 NDUFS1P28331 727 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ERVK-21P61565 698 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 RASGEF1BQ0VAM2 473 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CBFBQ13951 182 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC9B1Q4ZJI4 515 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 RFWD3Q6PCD5 774 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ASB9Q96DX5 294 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CARD8Q9Y2G2 431 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ANXA2P2A6NMY6 339 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 IFNA7P01567 189 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PIGRP01833 764 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ANXA2P07355 339 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 EVX2Q03828 476 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 DAG1Q14118 895 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 UBXN11Q5T124 520 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 DNAJA4Q8WW22 397 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 TMEM209Q96SK2 561 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 LGR4Q9BXB1 951 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 FGFBP2Q9BYJ0 223 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 TLR6Q9Y2C9 796 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PCDHGA3Q9Y5H0 932 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 STBD1O95210 358 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 RENP00797 406 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ZNF823P16415 610 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PDX1P52945 283 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC30A6Q6NXT4 461 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PSRC1Q6PGN9 363 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 ADGRD2Q7Z7M1 963 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 EIF3KQ9UBQ5 218 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 FKBPLQ9UIM3 349 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 GPR25O00155 361 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CDC40O60508 579 aaKnown RBP eCLIP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CBSLP0DN79 551 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CBSP35520 551 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PLEKHG4Q58EX7 1191 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PCDH19Q8TAB3 1148 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 CCDC107Q8WV48 283 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 TLE6Q9H808 572 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 TCF7L1Q9HCS4 588 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PRLP01236 227 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■■□ 23.6
HMGXB3-206ENST00000613459 MERTKQ12866 999 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 DEFB115Q30KQ5 88 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 PLPP4Q5VZY2 271 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 NAT16Q8N8M0 369 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 SIDT2Q8NBJ9 832 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 OR52J3Q8NH60 311 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 USP29Q9HBJ7 922 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 MKKSQ9NPJ1 570 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 WDR37Q9Y2I8 494 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 TMED5Q9Y3A6 229 aa17.1■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC38A8A6NNN8 435 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 PCCBP05166 539 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 EPHX1P07099 455 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 UGT1A3P35503 534 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 HID1Q8IV36 788 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 KLHL36Q8N4N3 616 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 DRAXINQ8NBI3 349 aaPredicted RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 ACDQ96AP0 544 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 OXSMQ9NWU1 459 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 MARK1Q9P0L2 795 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 KLF11O14901 512 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 TACSTD2P09758 323 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 IL12BP29460 328 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 PHC1P78364 1004 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 TPGS2Q68CL5 300 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 CYP2U1Q7Z449 544 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 CHST4Q8NCG5 386 aa17.09■□□□□ 0.33
HMGXB3-206ENST00000613459 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms