RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 DHRS12A0PJE2 317 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 MYOGP15173 224 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 MMP12P39900 470 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 AP1S2P56377 157 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 GRM2Q14416 872 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 GGTA1PQ4G0N0 100 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 UGT2A3Q6UWM9 527 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 RBM23Q86U06 439 aaKnown RBP27.39■■□□□ 1.98
CSPG5-205ENST00000610462 ZNF366Q8N895 744 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 BTN2A2Q8WVV5 523 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 ASZ1Q8WWH4 475 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 ZBTB18Q99592 522 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 ZNHIT2Q9UHR6 403 aa27.39■■□□□ 1.98
CSPG5-205ENST00000610462 QSOX1O00391 747 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 TIPRLO75663 272 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 DGKQP52824 942 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 POM121L1PQ3SYA9 428 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 CACHD1Q5VU97 1274 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 ERMP1Q7Z2K6 904 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 AMIGO2Q86SJ2 522 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 IFNEQ86WN2 208 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 RASGRP3Q8IV61 690 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 MCOLN3Q8TDD5 553 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 SMG7Q92540 1137 aaKnown RBP27.39■■□□□ 1.97
CSPG5-205ENST00000610462 VPS35Q96QK1 796 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 P2RY13Q9BPV8 354 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 COQ10BQ9H8M1 238 aa27.39■■□□□ 1.97
CSPG5-205ENST00000610462 HNRNPRO43390 633 aaKnown RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 SEC22BO75396 215 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 CHN2P52757 468 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 CPSF6Q16630 551 aaKnown RBP eCLIP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 AAK1Q2M2I8 961 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 PTCHD3Q3KNS1 767 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 MTX3Q5HYI7 312 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 LDLRAP1Q5SW96 308 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 ZNF648Q5T619 568 aaPredicted RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 PDE12Q6L8Q7 609 aaKnown RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 ERAP2Q6P179 960 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 LIPIQ6XZB0 460 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 BEND7Q8N7W2 519 aaPredicted RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 PPWD1Q96BP3 646 aaKnown RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 FAM83CQ9BQN1 747 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 C1orf109Q9NX04 203 aa27.38■■□□□ 1.97
CSPG5-205ENST00000610462 ZFC3H1O60293 1989 aaKnown RBP27.38■■□□□ 1.97
CSPG5-205ENST00000610462 TULP3O75386 442 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 SLCO2B1O94956 709 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 PSMA4P25789 261 aaKnown RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 PWP1Q13610 501 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 TBCELQ5QJ74 424 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 PARS2Q7L3T8 475 aaKnown RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 LIX1Q8N485 282 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 ANKFN1Q8N957 763 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 NUDT8Q8WV74 236 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 KCNE1BA0A087WTH5 132 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 OR2AG2A6NM03 316 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 AKAP10O43572 662 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 ELFN1P0C7U0 828 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 IL10P22301 178 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 HTR1EP28566 365 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 VIPR2P41587 438 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 PTGR1Q14914 329 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 RAVER1Q8IY67 606 aaKnown RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 GLB1L3Q8NCI6 653 aaPredicted RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 MTFMTQ96DP5 389 aaKnown RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 DPY30Q9C005 99 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 MTIF3Q9H2K0 278 aaKnown RBP27.37■■□□□ 1.97
CSPG5-205ENST00000610462 ZFP14Q9HCL3 533 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 AURKCQ9UQB9 309 aa27.37■■□□□ 1.97
CSPG5-205ENST00000610462 AP1G1O43747 822 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 PDYNP01213 254 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 GPIP06744 558 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 BMP2P12643 396 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 FXNQ16595 210 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 NEK5Q6P3R8 708 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 ADGRG5Q8IZF4 528 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 FAM110BQ8TC76 370 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 GLYATL1Q969I3 302 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 SNX6Q9UNH7 406 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 ACOX1Q15067 660 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 AASDHQ4L235 1098 aaPredicted RBP27.36■■□□□ 1.97
CSPG5-205ENST00000610462 ETFBKMTQ8IXQ9 262 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 C7orf61Q8IZ16 206 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 NRSN1Q8IZ57 195 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 ST13P4Q8IZP2 240 aaPredicted RBP27.36■■□□□ 1.97
CSPG5-205ENST00000610462 L3MBTL4Q8NA19 623 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 CGREF1Q99674 301 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 ACPTQ9BZG2 426 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 DNAJC11Q9NVH1 559 aa27.36■■□□□ 1.97
CSPG5-205ENST00000610462 MTHFD1P11586 935 aaKnown RBP27.35■■□□□ 1.97
CSPG5-205ENST00000610462 EN2P19622 333 aaPredicted RBP27.35■■□□□ 1.97
CSPG5-205ENST00000610462 C12orf76Q8N812 135 aaPredicted RBP27.35■■□□□ 1.97
CSPG5-205ENST00000610462 SLC13A3Q8WWT9 602 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 SELENOMQ8WWX9 145 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 PYCR2Q96C36 320 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 FBXL8Q96CD0 374 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 AP2M1Q96CW1 435 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 ZNF597Q96LX8 424 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 PPM1MQ96MI6 270 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 YIPF3Q9GZM5 350 aa27.35■■□□□ 1.97
CSPG5-205ENST00000610462 TCRBV5S2A0A599 114 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms