RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MYO1FO00160 1098 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SGTAO43765 313 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NADKO95544 446 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SKILP12757 684 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CDK11BP21127 795 aaKnown RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PRKCIP41743 596 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 WNT3AP56704 352 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MYL5Q02045 173 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TLE4Q04727 773 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NKG7Q16617 165 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 XKRXQ6PP77 449 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CEP97Q8IW35 865 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC25A41Q8N5S1 370 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ZNF398Q8TD17 642 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 LINC00615Q96LM1 132 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 LMF1Q96S06 567 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SPSB2Q99619 263 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MESP1Q9BRJ9 268 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SOX17Q9H6I2 414 aaPredicted RBP11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 WDR54Q9H977 334 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SEC14L3Q9UDX4 400 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ICKQ9UPZ9 632 aa11.32□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SVILO95425 2214 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 A0A1B0GX78 115 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 IFRD1O00458 451 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CYP1A2P05177 515 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CD1EP15812 388 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MST1P26927 711 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 KIR3DL1P43629 444 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TNNT3P45378 269 aaPredicted RBP11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TNFSF10P50591 281 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CASP6P55212 293 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TAS2R40P59535 323 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PTPRCAPQ14761 206 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PDK1Q15118 436 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CDSNQ15517 529 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 KDELC1Q6UW63 502 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TTLL10Q6ZVT0 673 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OVCH1Q7RTY7 1134 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MMP21Q8N119 569 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MTFMTQ96DP5 389 aaKnown RBP11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 C14orf79Q96F83 325 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RNF157Q96PX1 679 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OR2A14Q96R47 310 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MVB12BQ9H7P6 319 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 COG4Q9H9E3 785 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ZNF160Q9HCG1 818 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SPHK1Q9NYA1 384 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 HACD3Q9P035 362 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CTSFQ9UBX1 484 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FAM153AQ9UHL3 310 aa11.31□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 A0A0J9YY10 115 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 LOC285095A0A1B0GVY8 99 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 LRRD1A4D1F6 860 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PPP1R12AO14974 1030 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 STX7O15400 261 aaKnown RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC19A2O60779 497 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 F10P00742 488 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CHRM5P08912 532 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 AGAP20933 346 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PDHA2P29803 388 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 GCGRP47871 477 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PRLHRP49683 370 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SMSP52788 366 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 RBPJQ06330 500 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 BOP1Q14137 746 aaKnown RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 C3AR1Q16581 482 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NPNTQ6UXI9 565 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 COX15Q7KZN9 410 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DNAJC22Q8N4W6 341 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 DLG3Q92796 817 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 VPS50Q96JG6 964 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 OLFM3Q96PB7 478 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 CHRNA10Q9GZZ6 450 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ASB8Q9H765 288 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 MCCC2Q9HCC0 563 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 ABI3Q9P2A4 366 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PTGFRNQ9P2B2 879 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 TINAGQ9UJW2 476 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NXT1Q9UKK6 140 aaKnown RBP11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
PDLIM1P1-201ENST00000604187 NEU2Q9Y3R4 380 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms