RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 VSTM2BA6NLU5 285 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A9O60656 530 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 PRAMEF2O60811 474 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 MT-CYBP00156 380 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 F10P00742 488 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC4A1P02730 911 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 RARAP10276 462 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A6P19224 532 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A1P22309 533 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A4P22310 534 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 PBLDP30039 288 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 PCK1P35558 622 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 CASP6P55212 293 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ADAM8P78325 824 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 PAFAH1B3Q15102 231 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 IFI16Q16666 785 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC5A12Q1EHB4 618 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 TIGD7Q6NT04 549 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 TLDC1Q6P9B6 456 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 Q71RC1 249 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 BIVMQ86UB2 503 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 TRIM73Q86UV7 250 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 SPPL2CQ8IUH8 684 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 DNAJC22Q8N4W6 341 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 OR2L2Q8NH16 312 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 FAM71BQ8TC56 605 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 BRIX1Q8TDN6 353 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 THAP3Q8WTV1 239 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 NAT14Q8WUY8 206 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 GPR137Q96N19 417 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ADGRE3Q9BY15 652 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 GPR63Q9BZJ6 419 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 RNF32Q9H0A6 362 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 SRMSQ9H3Y6 488 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 LIME1Q9H400 295 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 DEF6Q9H4E7 631 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 TFB2MQ9H5Q4 396 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A7Q9HAW7 530 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A10Q9HAW8 530 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 UGT1A8Q9HAW9 530 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 GPAMQ9HCL2 828 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 BPIFA1Q9NP55 256 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 IL26Q9NPH9 171 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 TXLNGQ9NUQ3 528 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ACTR10Q9NZ32 417 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 PTGFRNQ9P2B2 879 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 ACSL5Q9ULC5 683 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 COLEC10Q9Y6Z7 277 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 A0A1W2PQ72 361 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 DYTNA2CJ06 578 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 GOLGA6L4A6NEF3 574 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 C2orf74A8MZ97 194 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNHIT1O43257 154 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 USP1O94782 785 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 WDPCPO95876 746 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 CD48P09326 243 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC35G4P0C7Q5 338 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 PRR35P0CG20 571 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 COX6A1P12074 109 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 HMGCLP35914 325 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ARSEP51690 589 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC25A11Q02978 314 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 FOLH1Q04609 750 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ZBTB17Q13105 803 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 RBBP7Q16576 425 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF658BQ4V348 819 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ATP13A4Q4VNC1 1196 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 BOLA3Q53S33 107 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 LDLRAP1Q5SW96 308 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 GPRC6AQ5T6X5 926 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 TMEM198Q66K66 360 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ATG9BQ674R7 924 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SPESP1Q6UW49 350 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SHISA6Q6ZSJ9 500 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 DAAM2Q86T65 1068 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 DMRTC2Q8IXT2 367 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SIRT6Q8N6T7 355 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 AMER2Q8N7J2 671 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 OR52E1Q8NGJ3 308 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 GDAP1Q8TB36 358 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 LCN9Q8WX39 176 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 HSPH1Q92598 858 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 LINC00615Q96LM1 132 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 TTC25Q96NG3 672 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 OR2A14Q96R47 310 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF160Q9HCG1 818 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SAMSN1Q9NSI8 373 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SEPT11Q9NVA2 429 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF358Q9NW07 568 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 SMOXQ9NWM0 555 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 CTSFQ9UBX1 484 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 MRPS2Q9Y399 296 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 HEBP2Q9Y5Z4 205 aa7.4□□□□□ -1.22
HERPUD1-206ENST00000563343 ATRQ13535 2644 aa7.4□□□□□ -1.23
HERPUD1-206ENST00000563343 ZANQ9Y493 2812 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms