RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 A0A0G2JNG1 304 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 A0A1B0GVT2 93 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 A6NCN8 305 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 NCF1BA6NI72 391 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 NCF1CA8MVU1 366 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 KIR2DS3K7RE56 304 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 YKT6O15498 198 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 GUCA1CO95843 209 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 MTHFD1P11586 935 aaKnown RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 NCF1P14598 390 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 BDKRB1P46663 353 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 RXRGP48443 463 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 PIK3CGP48736 1102 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ARRB1P49407 418 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 NAGLUP54802 743 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 KRT33BQ14525 404 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 KIR2DS5Q14953 304 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ARHGAP19Q14CB8 494 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 RPE65Q16518 533 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF542PQ5EBM4 170 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 PRRT3Q5FWE3 981 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF678Q5SXM1 525 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ANKS6Q68DC2 871 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 TTC19Q6DKK2 380 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 IL27RAQ6UWB1 636 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 PRR23BQ6ZRT6 265 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 HOMEZQ8IX15 550 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 OR9A1PQ8NGU1 263 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ZFPM2Q8WW38 1151 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 CHMP6Q96FZ7 201 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 TMEM237Q96Q45 408 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 INSM2Q96T92 566 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 RAB11FIP5Q9BXF6 653 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 TCEAL2Q9H3H9 227 aaPredicted RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 SPATA7Q9P0W8 599 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 RAB23Q9ULC3 237 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 STK38LQ9Y2H1 464 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 WDR37Q9Y2I8 494 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 PCDHGA5Q9Y5G8 931 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ST14Q9Y5Y6 855 aa16.94■□□□□ 0.3
LETMD1-220ENST00000549686 ATXN2Q99700 1313 aaKnown RBP16.94■□□□□ 0.3
LETMD1-220ENST00000549686 TCP11X1B4DZS4 312 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 SCAMP1O15126 338 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 SNNO75324 88 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 RPS17P08708 135 aaKnown RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 GALNT1Q10472 559 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 BST1Q10588 318 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 RCN2Q14257 317 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 CLCA4Q14CN2 919 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 KIF19Q2TAC6 998 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 LRRC70Q7Z2Q7 622 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 CCNYL1Q8N7R7 359 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 CCL4L1Q8NHW4 92 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 PPP4R1Q8TF05 950 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 C7orf26Q96N11 449 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 FERD3LQ96RJ6 166 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 PKP4Q99569 1192 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 ELF4Q99607 663 aaPredicted RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 CD244Q9BZW8 370 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 DRC3Q9H069 523 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 EML4Q9HC35 981 aaKnown RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 TMEM74BQ9NUR3 256 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 IMP3Q9NV31 184 aaKnown RBP16.93■□□□□ 0.3
LETMD1-220ENST00000549686 LNPEPQ9UIQ6 1025 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 CSNK1G3Q9Y6M4 447 aa16.93■□□□□ 0.3
LETMD1-220ENST00000549686 GMNCA6NCL1 334 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 LMO7DNF2Z398 122 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 AQP9O43315 295 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 STK16O75716 305 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 SUPT7LO94864 414 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 EPN2O95208 641 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 MLYCDO95822 493 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 VIMP08670 466 aaKnown RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 EEF1DP29692 281 aaKnown RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 SLC1A6P48664 564 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 ABCE1P61221 599 aaKnown RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 IYDQ6PHW0 289 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 ZCCHC23Q6ZST2 131 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 FRMD7Q6ZUT3 714 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 RBM12BQ8IXT5 1001 aaKnown RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 OR5AR1Q8NGP9 310 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 LMX1AQ8TE12 382 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 CXorf40BQ96DE9 158 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 ZNF317Q96PQ6 595 aaPredicted RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 KIR3DX1Q9H7L2 352 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 POT1Q9NUX5 634 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 PSD3Q9NYI0 1048 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 SLC6A14Q9UN76 642 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 DOLKQ9UPQ8 538 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.92■□□□□ 0.3
LETMD1-220ENST00000549686 SNX11Q9Y5W9 270 aa16.92■□□□□ 0.3
LETMD1-220ENST00000549686 THADAQ6YHU6 1953 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 K7EPI3 171 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 TAPBPO15533 448 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 PIAS2O75928 621 aa16.91■□□□□ 0.3
LETMD1-220ENST00000549686 XRCC1P18887 633 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms