RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ATL1Q8WXF7 558 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 CRELD1Q96HD1 420 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 SLC30A3Q99726 388 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 PAIP2Q9BPZ3 127 aaKnown RBP9.3□□□□□ -0.92
YBX3-215ENST00000544504 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 GSDMCQ9BYG8 508 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ALG9Q9H6U8 611 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 RDH14Q9HBH5 336 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 FGF22Q9HCT0 170 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 NUDT4Q9NZJ9 180 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 GALPQ9UBC7 116 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 COPG2Q9UBF2 871 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 XPR1Q9UBH6 696 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 EMCNQ9ULC0 261 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 CDYLQ9Y232 598 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 HEBP2Q9Y5Z4 205 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 ACACAQ13085 2346 aa9.3□□□□□ -0.92
YBX3-215ENST00000544504 GFYI3L273 518 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 J3QKU1 62 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 SNX2O60749 519 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 TRIM13O60858 407 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 MATN4O95460 622 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 BPGMP07738 259 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 ACP5P13686 325 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CTSEP14091 401 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 GRK2P25098 689 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 HK3P52790 923 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 WDR4P57081 412 aaKnown RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 DNAJB13P59910 316 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 HNRNPKP61978 463 aaKnown RBP eCLIP9.29□□□□□ -0.92
YBX3-215ENST00000544504 NFKB2Q00653 900 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CYP4F3Q08477 520 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 DLG1Q12959 904 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 TSNQ15631 228 aaKnown RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 ALG11Q2TAA5 492 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 ZNF658BQ4V348 819 aaPredicted RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 METTL2BQ6P1Q9 378 aaKnown RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 C16orf46Q6P387 395 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 WASH2PQ6VEQ5 465 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CYHR1Q6ZMK1 362 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 RD3Q7Z3Z2 195 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 PIWIL4Q7Z3Z4 852 aaKnown RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 SLCO6A1Q86UG4 719 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 AVL9Q8NBF6 648 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 FBXO15Q8NCQ5 510 aaPredicted RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 C1orf216Q8TAB5 229 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 LRRC8CQ8TDW0 803 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 ASB11Q8WXH4 323 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 OR1E3Q8WZA6 343 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 MAGEB18Q96M61 343 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 SLC12A9Q9BXP2 914 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CAPS2Q9BXY5 557 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 OSGEPL1Q9H4B0 414 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CCDC134Q9H6E4 229 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 ERVMER34-1Q9H9K5 563 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 PARVBQ9HBI1 364 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 WASH6PQ9NQA3 447 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 KLC4Q9NSK0 619 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 SLC17A7Q9P2U7 560 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 TNPO3Q9Y5L0 923 aaKnown RBP9.29□□□□□ -0.92
YBX3-215ENST00000544504 THADAQ6YHU6 1953 aa9.29□□□□□ -0.92
YBX3-215ENST00000544504 HECTD1Q9ULT8 2610 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 NPEPPSL1A6NEC2 478 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 TRABD2BA6NFA1 517 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 OR5K4A6NMS3 321 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 ZNF839A8K0R7 811 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 SUPT3HB4E1H0 165 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 TARM1B6A8C7 271 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 STX16-NPEPL1H3BU86 382 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 CDC7O00311 574 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 STX16O14662 325 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 KLF11O14901 512 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 DFNA5O60443 496 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 CBFA2T3O75081 653 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 PSIP1O75475 530 aaKnown RBP9.28□□□□□ -0.92
YBX3-215ENST00000544504 SUPT3HO75486 399 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 IPO13O94829 963 aaKnown RBP9.28□□□□□ -0.92
YBX3-215ENST00000544504 ANXA5P08758 320 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 GFAPP14136 432 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 NME1P15531 152 aaKnown RBP9.28□□□□□ -0.92
YBX3-215ENST00000544504 NDUFS1P28331 727 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 SERPINB5P36952 375 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 HSD17B2P37059 387 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 PREPP48147 710 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 HNMTP50135 292 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 ALDH18A1P54886 795 aaKnown RBP9.28□□□□□ -0.92
YBX3-215ENST00000544504 NXPH1P58417 271 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 FZD2Q14332 565 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 NFE2L1Q14494 772 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 ELOCQ15369 112 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 PDK4Q16654 411 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 PLA2G4EQ3MJ16 856 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 LIPMQ5VYY2 423 aa9.28□□□□□ -0.92
YBX3-215ENST00000544504 SBSNQ6UWP8 590 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms