RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZNF544Q6NX49 715 aa15.02■□□□□ -0
PCDHA3-202ENST00000532566 EXOSC8Q96B26 276 aaKnown RBP15.02■□□□□ -0
PCDHA3-202ENST00000532566 TRIT1Q9H3H1 467 aaKnown RBP15.02■□□□□ -0
PCDHA3-202ENST00000532566 ELAC1Q9H777 363 aaKnown RBP15.02■□□□□ -0
PCDHA3-202ENST00000532566 VPS29Q9UBQ0 182 aa15.02■□□□□ -0
PCDHA3-202ENST00000532566 DOCK2Q92608 1830 aa15.02■□□□□ -0
PCDHA3-202ENST00000532566 NHSQ6T4R5 1651 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 OR10H2O60403 315 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 PCCBP05166 539 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 BMP7P18075 431 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 CD68P34810 354 aaPredicted RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 GDF5P43026 501 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ACADVLP49748 655 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ATP4BP51164 291 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 CCR4P51679 360 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 USP39Q53GS9 565 aaKnown RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ARSIQ5FYB1 569 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 PERM1Q5SV97 790 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 FAM124AQ86V42 546 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 OR10G6Q8NH81 332 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 BORCS5Q969J3 196 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 PRR11Q96HE9 360 aaPredicted RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 NODALQ96S42 347 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 MIPEPQ99797 713 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 DHRS4Q9BTZ2 278 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 RIOK2Q9BVS4 552 aaKnown RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 OR2AG1Q9H205 316 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 EXD2Q9NVH0 621 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 EHD3Q9NZN3 535 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 PDE10AQ9Y233 779 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 UGT2B17O75795 530 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 NR2F6P10588 404 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 DAG1Q14118 895 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 HEPACAMQ14CZ8 416 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 RANBP10Q6VN20 620 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ZNF513Q8N8E2 541 aaPredicted RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 VANGL1Q8TAA9 524 aaPredicted RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ZSCAN5AQ9BUG6 496 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 SERHL2Q9H4I8 314 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 SERHLQ9NQF3 203 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 KLHL1Q9NR64 748 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 MTMR10Q9NXD2 777 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 ATP6V1HQ9UI12 483 aa15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 TNRC6CQ9HCJ0 1690 aaKnown RBP15.02□□□□□ -0.01
PCDHA3-202ENST00000532566 LOC730098B7Z3J9 87 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 INPPL1O15357 1258 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 FADS2O95864 444 aaKnown RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 CYBAP13498 195 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PTSQ03393 145 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 LRRC66Q68CR7 880 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 C22orf39Q6P5X5 142 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 SLC2A7Q6PXP3 512 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 VN1R5Q7Z5H4 357 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PIK3C3Q8NEB9 887 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 TEX47Q8TBZ9 253 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 EFCAB11Q9BUY7 163 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 MARCH4Q9P2E8 410 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 SLC22A14Q9Y267 594 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PDLIM1O00151 329 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 CD1DP15813 335 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PPP1R3AQ16821 1122 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PDSS2Q86YH6 399 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 GALNT13Q8IUC8 556 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PRICKLE1Q96MT3 831 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 ITM2CQ9NQX7 267 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 ZNF282Q9UDV7 671 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 G6PDP11413 515 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 CWF19L1Q69YN2 538 aaKnown RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 FAM171BQ6P995 826 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 ZNF783Q6ZMS7 281 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 SLC43A3Q8NBI5 491 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 OR5K1Q8NHB7 308 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 OR14C36Q8NHC7 312 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 HM13Q8TCT9 377 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 MOCOSQ96EN8 888 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 MS4A4AQ96JQ5 239 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 C11orf84Q9BUA3 381 aaPredicted RBP15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 TDP1Q9NUW8 608 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 DHRS7Q9Y394 339 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
PCDHA3-202ENST00000532566 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15□□□□□ -0.01
PCDHA3-202ENST00000532566 ASNA1O43681 348 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 ATP1B2P14415 290 aaPredicted RBP15□□□□□ -0.01
PCDHA3-202ENST00000532566 ZNF30P17039 623 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 ARSDP51689 593 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 EMX2Q04743 252 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 TAZQ16635 292 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 NXPE1Q8N323 547 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 DDX51Q8N8A6 666 aaKnown RBP eCLIP15□□□□□ -0.01
PCDHA3-202ENST00000532566 OR52J3Q8NH60 311 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 ADAMTS15Q8TE58 950 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 HDHD2Q9H0R4 259 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 PCDH7O60245 1069 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 SOCS5O75159 536 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 STX11O75558 287 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 RPS6KA3P51812 740 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 PLEKHG6Q3KR16 790 aa15□□□□□ -0.01
PCDHA3-202ENST00000532566 SFT2D3Q587I9 215 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms