RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ZNF667Q5HYK9 610 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOMO2Q5JPE7 1267 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CXorf66Q5JRM2 361 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TCTE1Q5JU00 501 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA1755Q5JYT7 1200 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C6orf141Q5SZD1 244 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CEP85LQ5SZL2 805 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC122Q5T0U0 273 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TREML2Q5T2D2 321 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RBM20Q5T481 1227 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBAP2Q5T6F2 1119 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C10orf25Q5T742 122 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNASEH2BQ5TBB1 312 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYP4A22Q5TCH4 519 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C6orf163Q5TEZ5 329 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP40Q5TG30 622 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERTAD4-AS1Q5TG53 156 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 VWA5B1Q5TIE3 1220 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC38Q5VT99 294 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AADACL4Q5VUY2 407 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGEF16Q5VV41 709 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C1QL3Q5VWW1 255 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM268Q5VZI3 342 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 B3GNTL1Q67FW5 361 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 OLFML2AQ68BL7 652 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACSM2BQ68CK6 577 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCTD11Q693B1 232 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NADSYN1Q6IA69 706 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6B2Q6IFH4 312 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NAPEPLDQ6IQ20 393 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLEKHA7Q6IQ23 1121 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RGS7BPQ6MZT1 257 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAAP20Q6NZ36 180 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXL22Q6P050 247 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACSM6Q6P461 480 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM122CQ6P4D5 195 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NOTUMQ6P988 496 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRRC8BQ6P9F7 803 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC27A1Q6PCB7 646 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CTR9Q6PD62 1173 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZCCHC12Q6PEW1 402 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PAPD4Q6PIY7 484 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM65Q6PJ69 517 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 BRAT1Q6PJG6 821 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARSKQ6UWY0 536 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 C16orf89Q6UX73 402 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA1324Q6UXG2 1013 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ISLR2Q6UXK2 745 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LRIG3Q6UXM1 1119 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RANBP10Q6VN20 620 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NHLRC1Q6VVB1 395 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 NAPRTQ6XQN6 538 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC30A10Q6XR72 485 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 B3GNT6Q6ZMB0 384 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF793Q6ZN11 406 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CFAP77Q6ZQR2 320 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZBTB49Q6ZSB9 765 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q6ZTC4 211 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SEPT14Q6ZU15 432 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 STXBP4Q6ZWJ1 553 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM57BQ71RH2 274 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 INTS8Q75QN2 995 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MTSS1LQ765P7 747 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MARK2Q7KZI7 788 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRILQ7L0X0 811 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYB5R4Q7L1T6 521 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARMCX2Q7L311 632 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRMT1LQ7Z2T5 733 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATG9AQ7Z3C6 839 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMPRSS9Q7Z410 1059 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRSS42Q7Z5A4 293 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TECPR1Q7Z6L1 1165 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CENPVQ7Z7K6 275 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPAT4Q86UL3 456 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 RTN4RL2Q86UN3 420 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 VASH2Q86V25 355 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR180Q86V85 440 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF410Q86VK4 478 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CAND1Q86VP6 1230 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 AMZ2Q86W34 360 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM173Q86WV6 379 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF573Q86YE8 665 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA2LQ8IUW3 424 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 UNC5CLQ8IV45 518 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARID3BQ8IVW6 561 aaPredicted RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC83Q8IWF9 413 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDH26Q8IXH8 852 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 LAS2Q8IYD9 372 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 IZUMO1Q8IYV9 350 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF679Q8IYX0 411 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRF4Q8IZF3 695 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRG5Q8IZF4 528 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ABRAQ8N0Z2 381 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTC5Q8N0Z6 440 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 MMP21Q8N119 569 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 GHDCQ8N2G8 530 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZCCHC9Q8N567 271 aaKnown RBP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARFGAP2Q8N6H7 521 aa0.57□□□□□ -2.32
RNU4-54P-201ENST00000516428 METTL25Q8N6Q8 603 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms