RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TRIT1Q9H3H1 467 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 KIR3DX1Q9H7L2 352 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 CAAP1Q9H8G2 361 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC40A1Q9NP59 571 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TMEM9BQ9NQ34 198 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM8A1Q9UBU6 413 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 TMCO1Q9UM00 188 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 PSMD13Q9UNM6 376 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 RUVBL2Q9Y230 463 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 OARD1Q9Y530 152 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 PCM1Q15154 2024 aa11.67□□□□□ -0.54
PDLIM5-220ENST00000514830 OR52A4PA6NMU1 304 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 SYCE1LA8MT33 242 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ARHGEF33A8MVX0 844 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 FOXO6A8MYZ6 492 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 GOLGA8RI6L899 631 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 CDC7O00311 574 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 BTN3A1O00481 513 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 COPEO14579 308 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 TM9SF1O15321 606 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 NUDT21O43809 227 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ERGP11308 486 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 PNLIPP16233 465 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 TFEBP19484 476 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 CYP2A7P20853 494 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 HSD17B2P37059 387 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 GRK6P43250 576 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 LIMK1P53667 647 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ABRQ12979 859 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 GRB7Q14451 532 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ARHGAP19Q14CB8 494 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 DEFB133Q30KQ1 61 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 TTMPQ5BVD1 217 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 UBE2R2Q712K3 238 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 C4orf33Q8N1A6 199 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ARL14Q8N4G2 192 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 RDH11Q8TC12 318 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 MCOLN3Q8TDD5 553 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 DLG3Q92796 817 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 RAD51AP1Q96B01 352 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 CXorf40BQ96DE9 158 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 TRIM54Q9BYV2 358 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 MRPL46Q9H2W6 279 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 STN1Q9H668 368 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 SPATA7Q9P0W8 599 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ADAMTS6Q9UKP5 1117 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 IKZF3Q9UKT9 509 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 EMCNQ9ULC0 261 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 PDE10AQ9Y233 779 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 ASF1AQ9Y294 204 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 DMXL1Q9Y485 3027 aa11.66□□□□□ -0.54
PDLIM5-220ENST00000514830 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 FAM221BA6H8Z2 402 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 NPEPPSL1A6NEC2 478 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 LILRA5A6NI73 299 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 B4DGG1 531 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TRIM38O00635 465 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 KLK8O60259 260 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 PROCP04070 461 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 SBK3P0C264 359 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 CD59P13987 128 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 MTHFD2P13995 350 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 MAP4P27816 1152 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 GMPRP36959 345 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 RPIAP49247 311 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 HNMTP50135 292 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 MAGOHP61326 146 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 IL9RQ01113 521 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 GPS2Q13227 327 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TGFBIQ15582 683 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 OR4D1Q15615 310 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TSNQ15631 228 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 PHKG1Q16816 387 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 ST3GAL2Q16842 350 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 PROX2Q3B8N5 592 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 METTL2BQ6P1Q9 378 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TTC23LQ6PF05 361 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 CDHR3Q6ZTQ4 885 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 GATAD2AQ86YP4 633 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 SLC35F3Q8IY50 421 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 KLHDC8AQ8IYD2 350 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TCAIMQ8N3R3 496 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 PDPRQ8NCN5 879 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 OR5AR1Q8NGP9 310 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 OR2I1PQ8NGU4 316 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 HMGCLL1Q8TB92 370 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 NETO1Q8TDF5 533 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 CCDC138Q96M89 665 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 MENTQ9BUN1 341 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms