RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UBASH3AP57075 661 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 IFI35P80217 286 aaPredicted RBP11.14□□□□□ -0.63
RNF4-216ENST00000511859 Q0VFX4 171 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 DPYSL3Q14195 570 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 PCSK7Q16549 785 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 FILIP1LQ4L180 1135 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SARM1Q6SZW1 724 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SPESP1Q6UW49 350 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 AMIGO1Q86WK6 493 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 CFAP206Q8IYR0 622 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 C19orf47Q8N9M1 422 aaKnown RBP11.14□□□□□ -0.63
RNF4-216ENST00000511859 ADAMTS18Q8TE60 1221 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 LRRN4Q8WUT4 740 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 DLG3Q92796 817 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 TADA1Q96BN2 335 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SLC25A51Q9H1U9 297 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SLC26A1Q9H2B4 701 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 GPAMQ9HCL2 828 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SEMA3GQ9NS98 782 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SLC22A11Q9NSA0 550 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SMOXQ9NWM0 555 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 ACTR10Q9NZ32 417 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 MYO1AQ9UBC5 1043 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SH3BGRL2Q9UJC5 107 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 NXT1Q9UKK6 140 aaKnown RBP11.14□□□□□ -0.63
RNF4-216ENST00000511859 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 SPO11Q9Y5K1 396 aa11.14□□□□□ -0.63
RNF4-216ENST00000511859 GLYATL1P3A0A0U1RQE8 302 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 A0A1B0GTH6 734 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 SLC19A2O60779 497 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 RASAL1O95294 804 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 POLBP06746 335 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ITGAXP20702 1163 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 AKT1P31749 480 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ARSEP51690 589 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ARSFP54793 590 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
RNF4-216ENST00000511859 SLC10A2Q12908 348 aaPredicted RBP11.13□□□□□ -0.63
RNF4-216ENST00000511859 PDK2Q15119 407 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 NKG7Q16617 165 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 HADHQ16836 314 aaKnown RBP11.13□□□□□ -0.63
RNF4-216ENST00000511859 FAAH2Q6GMR7 532 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 TMEM151BQ8IW70 566 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 MAP7D3Q8IWC1 876 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ADGRF3Q8IZF5 1079 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ACBD4Q8NC06 268 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 OR11G2Q8NGC1 345 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 RBM41Q96IZ5 413 aaKnown RBP11.13□□□□□ -0.63
RNF4-216ENST00000511859 ZNF830Q96NB3 372 aaPredicted RBP11.13□□□□□ -0.63
RNF4-216ENST00000511859 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 MVB12BQ9H7P6 319 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 IRAK4Q9NWZ3 460 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 IL17CQ9P0M4 197 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 IP6K2Q9UHH9 426 aa11.13□□□□□ -0.63
RNF4-216ENST00000511859 C17orf113A0A1B0GUU1 675 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 HCRTR1O43613 425 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 PMPCBO75439 489 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 USP1O94782 785 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 HPP00738 406 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 MST1P26927 711 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 CD151P48509 253 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 CSNK1G2P78368 415 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 GBE1Q04446 702 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 ZBTB17Q13105 803 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 RBBP7Q16576 425 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 BCL7AQ4VC05 210 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 FAM151BQ6UXP7 276 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 DET1Q7L5Y6 550 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 KCTD6Q8NC69 237 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 OR52E1Q8NGJ3 308 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 CCDC110Q8TBZ0 833 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 ZNF398Q8TD17 642 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 SPSB2Q99619 263 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 TREX2Q9BQ50 279 aaPredicted RBP11.12□□□□□ -0.63
RNF4-216ENST00000511859 HACD3Q9P035 362 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 PLCL2Q9UPR0 1127 aa11.12□□□□□ -0.63
RNF4-216ENST00000511859 MRPS2Q9Y399 296 aaKnown RBP11.12□□□□□ -0.63
RNF4-216ENST00000511859 A0A1B0GX78 115 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 IFRD1O00458 451 aaPredicted RBP11.11□□□□□ -0.63
RNF4-216ENST00000511859 DRD2P14416 443 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 FDXRP22570 491 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 CARSP49589 748 aaKnown RBP11.11□□□□□ -0.63
RNF4-216ENST00000511859 NR1I3Q14994 352 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 CDSNQ15517 529 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 ZIC1Q15915 447 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 DEFB110Q30KQ9 67 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 TTLL10Q6ZVT0 673 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 DNAJC22Q8N4W6 341 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 CHDHQ8NE62 594 aaPredicted RBP11.11□□□□□ -0.63
RNF4-216ENST00000511859 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 FAF2Q96CS3 445 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 TRIM5Q9C035 493 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
RNF4-216ENST00000511859 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
RNF4-216ENST00000511859 DEF6Q9H4E7 631 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms